RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR4C12	Q96R67	309 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GPA33	Q99795	319 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MRPL22	Q9NWU5	206 aa	Known RBP	13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FBXL17	Q9UF56	701 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TCAP	O15273	167 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ADAP1	O75689	374 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IGKV3-11	P04433	115 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DYNLT3	P51808	116 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HOGA1	Q86XE5	327 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C5orf17	Q8NAS9	161 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SSMEM1	Q8WWF3	244 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532		J3KRW8	73 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PSG5	Q15238	335 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DYRK2	Q92630	601 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DCTN5	Q9BTE1	182 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MBP	P02686	304 aa	Predicted RBP	13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PRDM14	Q9GZV8	571 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IDI2-AS1	Q9NZ38	188 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DOCK3	Q8IZD9	2030 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IGHV3-72	A0A0B4J1Y9	119 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A10P	A6NDY2	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A18P	A6NE21	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A16P	A6NEW6	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A20P	A6NIJ5	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A8P	A6NJQ4	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A7P	A6NKC0	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A22P	A8MWA6	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A12P	A8MX19	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A5P	A8MXJ8	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A23P	A8MXZ1	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CORT	O00230	105 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IGF2	P01344	180 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A15P	P0C7V4	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A13P	P0C7W8	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A14P	P0C7W9	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM90A24P	P0C7X0	464 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF66	Q6ZN08	573 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR4A5	Q8NH83	315 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NEU4	Q8WWR8	484 aa	Predicted RBP	13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NRXN2	Q9P2S2	1712 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DUXB	A0A1W2PPF3	345 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	KIR3DL2	P43630	455 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	KLF9	Q13886	244 aa	Predicted RBP	13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR4P4	Q8NGL7	312 aa		13.6	□□□□□ -0.23
NCAPD3-213	ENST00000534532	RECK	O95980	971 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TEPP	Q6URK8	271 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ODAM	A1E959	279 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PSG2	P11465	335 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GLRX	P35754	106 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LINC00470	Q9BZP3	86 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	RALY	Q9UKM9	306 aa	Known RBP	13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	KLHDC2	Q9Y2U9	406 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM106A	Q4KMX7	169 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PRSS3P2	Q8NHM4	247 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PF4	P02776	101 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CD1A	P06126	327 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TMEM33	P57088	247 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TMEM30B	Q3MIR4	351 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SIRT7	Q9NRC8	400 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MRPS18A	Q9NVS2	196 aa	Known RBP	13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C4orf51	C9J302	202 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ROM1	Q03395	351 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LY6E	Q16553	131 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C16orf82	Q7Z2V1	217 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TCTEX1D1	Q8N7M0	179 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR9G1	Q8NH87	305 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CALY	Q9NYX4	217 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NAT8B	Q9UHF3	227 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HIGD1A	Q9Y241	93 aa		13.59	□□□□□ -0.23
NCAPD3-213	ENST00000534532	B2M	P61769	119 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DEFA6	Q01524	100 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FAM27E3	Q08E93	113 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	STPG3	Q8N7X2	389 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MANBAL	Q9NQG1	85 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	LIMS1	P48059	325 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SULT1A1	P50225	295 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	C19orf35	Q6ZS72	473 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM18	Q96B42	140 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IGLV1-36	A0A0B4J1U3	117 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FCGR3A	P08637	254 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FST	P19883	344 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	METTL26	Q96S19	204 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IGHV3-21	A0A0B4J1V1	117 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	APCDD1L	Q8NCL9	501 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM45B	Q96B21	275 aa		13.58	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NEURL1	O76050	574 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ABHD12	Q8N2K0	398 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ST6GALNAC2	Q9UJ37	374 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IGSF23	A1L1A6	192 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DHRS7C	A6NNS2	312 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FUT5	Q11128	374 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532		Q1RN00	199 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CLEC7A	Q9BXN2	247 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	HYPM	O75409	117 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PDZD11	Q5EBL8	140 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	GUCD1	Q96NT3	240 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FOCAD	Q5VW36	1801 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RFPL3S	P0C7P2	107 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms