RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SHISA3A0PJX4 238 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 SPINK4O60575 86 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 ZNF273Q14593 569 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 SRXN1Q9BYN0 137 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 TIMM9Q9Y5J7 89 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 FAM90A27PA6NNH2 459 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 DAOP14920 347 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 POLR2GP62487 172 aaKnown RBP eCLIP14.96□□□□□ -0.01
PHRF1-206ENST00000534320 CDCP2Q5VXM1 449 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 ZNF343Q6P1L6 599 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 AKIRIN1Q9H9L7 192 aaPredicted RBP14.96□□□□□ -0.01
PHRF1-206ENST00000534320 OR6C3Q9NZP0 311 aa14.96□□□□□ -0.01
PHRF1-206ENST00000534320 GAGE10A6NGK3 116 aa14.96□□□□□ -0.02
PHRF1-206ENST00000534320 RHBDL1O75783 438 aa14.96□□□□□ -0.02
PHRF1-206ENST00000534320 MRPL24Q96A35 216 aaKnown RBP14.96□□□□□ -0.02
PHRF1-206ENST00000534320 OR2J1Q9GZK6 312 aa14.96□□□□□ -0.02
PHRF1-206ENST00000534320 NEURL1O76050 574 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 PMELP40967 661 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 TBX15Q96SF7 602 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 HES7Q9BYE0 225 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 CCL28Q9NRJ3 127 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 PRSS50Q9UI38 385 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 FAM74A7A6NL05 159 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 DDTP30046 118 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 RIPPLY2Q5TAB7 128 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 CHCHD2Q9Y6H1 151 aaPredicted RBP14.95□□□□□ -0.02
PHRF1-206ENST00000534320 SLC38A11Q08AI6 406 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 TGIF1Q15583 401 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 LEMD1Q68G75 181 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 LINC00596Q86U02 117 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 OOEPA6NGQ2 149 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 RPL11P62913 178 aaKnown RBP14.95□□□□□ -0.02
PHRF1-206ENST00000534320 DLK1P80370 383 aa14.95□□□□□ -0.02
PHRF1-206ENST00000534320 VDAC1P21796 283 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 VAX1Q5SQQ9 334 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 SLC45A2Q9UMX9 530 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 hADV38S2A0JD32 116 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 SMIM17P0DL12 118 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 ACP1P24666 158 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 OVCH2Q7RTZ1 564 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 RP1P56715 2156 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 A0A1B0GV72 72 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 HFEQ30201 348 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 CEACAM21Q3KPI0 293 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 FAM214BQ7L5A3 538 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 TMEM210A6NLX4 147 aa14.94□□□□□ -0.02
PHRF1-206ENST00000534320 CA11O75493 328 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 GCGP01275 180 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 FCGR3AP08637 254 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 VN1R17PQ8TDU5 208 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 GAL3ST2Q9H3Q3 398 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 FUT9Q9Y231 359 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 P2RY1P47900 373 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 ATP6V1FQ16864 119 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 OR10G8Q8NGN5 311 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 ELF5Q9UKW6 265 aaPredicted RBP14.93□□□□□ -0.02
PHRF1-206ENST00000534320 YIF1AO95070 293 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 SNAI3Q3KNW1 292 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 MOGAT3Q86VF5 341 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 LRRC75AQ8NAA5 344 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 IGHV3-13P01766 116 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 IGHV3-7P01780 117 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 PAFAH1B2P68402 229 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 VMA21Q3ZAQ7 101 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
PHRF1-206ENST00000534320 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 FOXJ2Q9P0K8 574 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 OR2W1Q9Y3N9 320 aa14.93□□□□□ -0.02
PHRF1-206ENST00000534320 K7ESF4 209 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 CDK2AP1O14519 115 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 FAM74A3Q4VXF1 159 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 MOB3BQ86TA1 216 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 MANBALQ9NQG1 85 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 DMRT1Q9Y5R6 373 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 IFITM10A6NMD0 228 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 MBPP02686 304 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-206ENST00000534320 PRSS1P07477 247 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 LYZL2Q7Z4W2 148 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 OR4A4PQ8NGN8 299 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 SDHCQ99643 169 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-206ENST00000534320 ZNF256Q9Y2P7 627 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-206ENST00000534320 LIPGQ9Y5X9 500 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 TRAV39A0A0B4J263 110 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 ZNF883P0CG24 379 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 EIF4E3Q8N5X7 224 aaKnown RBP14.92□□□□□ -0.02
PHRF1-206ENST00000534320 AQP3Q92482 292 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 KIR2DS2P43631 304 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 C10orf128Q5T292 105 aa14.92□□□□□ -0.02
PHRF1-206ENST00000534320 IGLV3-12A0A075B6K2 115 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 DIRC3C9JPN6 131 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 PRF1P14222 555 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 MS4A3Q96HJ5 214 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 LRRC3CA6NJW4 275 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 CDC34P49427 236 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-206ENST00000534320 SCGB1D4Q6XE38 83 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 ZNHIT1O43257 154 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 RAMP1O60894 148 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 IL24Q13007 206 aa14.91□□□□□ -0.02
PHRF1-206ENST00000534320 NFAM1Q8NET5 270 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-206ENST00000534320 RND1Q92730 232 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms