RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 DEFB114Q30KQ6 69 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 AKIRIN2Q53H80 203 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 COQ5Q5HYK3 327 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 DEGS2Q6QHC5 323 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 Q6ZSR3 168 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 SLC25A48Q6ZT89 311 aaKnown RBP4.76□□□□□ -1.65
CD44-237ENST00000534082 RASSF6Q6ZTQ3 369 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 TMEM179BQ7Z7N9 219 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 LILRB2Q8N423 598 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 POC5Q8NA72 575 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 OR9Q2Q8NGE9 314 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 OR52B4Q8NGK2 314 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 RDH12Q96NR8 316 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 MROQ9BYG7 248 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 TTTY10Q9BZA0 68 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 CHST5Q9GZS9 411 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
CD44-237ENST00000534082 ARMC1Q9NVT9 282 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 NKIRAS1Q9NYS0 192 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 PEF1Q9UBV8 284 aaKnown RBP4.76□□□□□ -1.65
CD44-237ENST00000534082 BAIAP2Q9UQB8 552 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 GAB2Q9UQC2 676 aa4.76□□□□□ -1.65
CD44-237ENST00000534082 FLG2Q5D862 2391 aaPredicted RBP4.75□□□□□ -1.65
CD44-237ENST00000534082 IGHV4-4A0A075B6R2 117 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IGHV3-43A0A0B4J1X8 118 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 A0A0B4J203 849 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IGKV1-12A0A0C4DH73 117 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 A0A0G2JLM5 398 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 BBIP1A8MTZ0 92 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 DEGS1O15121 323 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 ZNF254O75437 659 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 SRSF10O75494 262 aaKnown RBP4.75□□□□□ -1.65
CD44-237ENST00000534082 IGKV1D-12P01611 117 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IGHV3-43DP0DP04 118 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 NCK1P16333 377 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 EDN2P20800 178 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 CCL1P22362 96 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 RIDAP52758 137 aaKnown RBP4.75□□□□□ -1.65
CD44-237ENST00000534082 HCCSP53701 268 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 ATP1B3P54709 279 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 LINC00205P59089 165 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 CTAG1AP78358 180 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 ROM1Q03395 351 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 LIPEQ05469 1076 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 CDK5R1Q15078 307 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 PAN3Q58A45 887 aaKnown RBP4.75□□□□□ -1.65
CD44-237ENST00000534082 RSBN1Q5VWQ0 802 aaPredicted RBP4.75□□□□□ -1.65
CD44-237ENST00000534082 ELMOD2Q8IZ81 293 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 POM121L12Q8N7R1 296 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 STPG3Q8N7X2 389 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 BVESQ8NE79 360 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 LFNGQ8NES3 379 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 NPBQ8NG41 125 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 UBALD1Q8TB05 177 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 PLPPR1Q8TBJ4 325 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 RFT1Q96AA3 541 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 ANAPC16Q96DE5 110 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 BTBD10Q9BSF8 475 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 FBXL15Q9H469 300 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 NCOR1P1Q9H4R4 102 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IL1RAPQ9NPH3 570 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 CMTM6Q9NX76 183 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IKZF2Q9UKS7 526 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 SELENOKQ9Y6D0 94 aa4.75□□□□□ -1.65
CD44-237ENST00000534082 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 KIR2DL5BA0A0G2JN68 375 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 KIR2DL5BA0A0G2JPC4 375 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 LINC00854A0A1B0GVQ3 168 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 C11orf94C9JXX5 98 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 H0YJX3 145 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 H3BUA1 57 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 LANCL1O43813 399 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 KDM4BO94953 1096 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 APOL3O95236 402 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 RBMY1CP0DJD4 496 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 P0DMU3 169 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 FAM231AP0DMU4 169 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 FAM231CP0DMU5 169 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 FOLR2P14207 255 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 AADACP22760 399 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 RRM2P31350 389 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 FCGR2BP31994 310 aaPredicted RBP4.74□□□□□ -1.65
CD44-237ENST00000534082 MTCP1P56278 107 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 VSNL1P62760 191 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 PDZK1IP1Q13113 114 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 PLGLAQ15195 96 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 MRGPRG-AS1Q2M3A8 158 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 TM4SF20Q53R12 229 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 PLEKHG7Q6ZR37 379 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 Q6ZR54 194 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 ZNF679Q8IYX0 411 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 TMEM61Q8N0U2 210 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 KIR2DL5AQ8N109 375 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 TCEANCQ8N8B7 351 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 NKAIN3Q8N8D7 197 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 ZNF439Q8NDP4 499 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 OR52M1Q8NGK5 317 aa4.74□□□□□ -1.65
CD44-237ENST00000534082 OR5D18Q8NGL1 313 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms