RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MOGAT2Q3SYC2 334 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 MORN2Q502X0 79 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 SLC25A48Q6ZT89 311 aaKnown RBP7.59□□□□□ -1.19
SSBP3-215ENST00000533946 NDUFA11Q86Y39 141 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 LINC00311Q8N616 119 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 MBNL3Q9NUK0 354 aaKnown RBP7.59□□□□□ -1.19
SSBP3-215ENST00000533946 OR1A1Q9P1Q5 309 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 MOB4Q9Y3A3 225 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 HUWE1Q7Z6Z7 4374 aaKnown RBP7.58□□□□□ -1.2
SSBP3-215ENST00000533946 IGKV1-6A0A0C4DH72 117 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 ST8SIA5O15466 376 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 ORC5O43913 435 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 CPEP16870 476 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 GZMHP20718 246 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 CEACAM3P40198 252 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 MED21Q13503 144 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 DEFB136Q30KP8 78 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 HSD17B12Q53GQ0 312 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 RPL39P5Q59GN2 51 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 PLAC9Q5JTB6 97 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 KPRPQ5T749 579 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-215ENST00000533946 HES5Q5TA89 166 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 GLDNQ6ZMI3 551 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-215ENST00000533946 LINC00596Q86U02 117 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 THNSL2Q86YJ6 484 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 OR51D1Q8NGF3 324 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 PHF21AQ96BD5 680 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-215ENST00000533946 MGLLQ99685 303 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF251Q9BRH9 671 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 UQCC2Q9BRT2 126 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 MRPL20Q9BYC9 149 aaKnown RBP7.58□□□□□ -1.2
SSBP3-215ENST00000533946 OR2S2Q9NQN1 319 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 AK3Q9UIJ7 227 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 KCNK7Q9Y2U2 307 aa7.58□□□□□ -1.2
SSBP3-215ENST00000533946 TMEM272A0A1B0GTI8 110 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 NCBP2LA6PVI3 153 aaKnown RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 OOSP1A8MZH6 123 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF780AO75290 641 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 PEX14O75381 377 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 ATP6V1G2O95670 118 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 NAPSAO96009 420 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 GAPDHP04406 335 aaKnown RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 RPLP1P05386 114 aaKnown RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 SCTP09683 121 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 FAM106CPP0CH98 169 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 SLC2A2P11168 524 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 BLVRBP30043 206 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 MNDAP41218 407 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 EMX1Q04741 257 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 HMGN3Q15651 99 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 C2orf76Q3KRA6 126 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 KHDC1LQ5JSQ8 128 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 FOXB2Q5VYV0 432 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF880Q6PDB4 577 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 CDH26Q8IXH8 852 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 OR10A7Q8NGE5 316 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 OR52M1Q8NGK5 317 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 SETD6Q8TBK2 473 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 CASTOR1Q8WTX7 329 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 MAFIPQ8WZ33 124 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 UFD1Q92890 307 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 C5orf30Q96GV9 206 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 ARHGAP5-AS1Q96IT6 56 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 ABHD14BQ96IU4 210 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 NABP2Q9BQ15 211 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 TM2D1Q9BX74 207 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 IFI27L2Q9H2X8 130 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 RNF167Q9H6Y7 350 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 SCN3BQ9NY72 215 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 GNG12Q9UBI6 72 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 RNF150Q9ULK6 438 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 FBXO7Q9Y3I1 522 aa7.57□□□□□ -1.2
SSBP3-215ENST00000533946 AMMECR1Q9Y4X0 333 aaPredicted RBP7.57□□□□□ -1.2
SSBP3-215ENST00000533946 IGKV1D-8A0A087WSZ0 117 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 WI2-2373I1.2A0A1W2PRP0 233 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 SERPINE3A8MV23 424 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 G3V318 75 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 FCN1O00602 326 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 IGHG2P01859 326 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 GPR12P47775 334 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 VEGFCP49767 419 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 RAB7AP51149 207 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF137PP52743 207 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 NDPQ00604 133 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 MLLT11Q13015 90 aaPredicted RBP7.56□□□□□ -1.2
SSBP3-215ENST00000533946 LSAMPQ13449 338 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 GPR176Q14439 515 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 PRSS48Q7RTY5 328 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 C16orf82Q7Z2V1 217 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 IZUMO1Q8IYV9 350 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 OR8H3Q8N146 312 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 FAM89BQ8N5H3 189 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 MS4A15Q8N5U1 240 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms