RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TUSC1Q2TAM9 212 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 ZNF552Q9H707 407 aaPredicted RBP12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 CRHP06850 196 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM87AP0C7U9 286 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 SULT1A1P50225 295 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 NHLH1Q02575 133 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 NHLH2Q02577 135 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 CCL13Q99616 98 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM186AA6NE01 2351 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 FCN1O00602 326 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 ADAM11O75078 769 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 LOXL3P58215 753 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 RIPPLY2Q5TAB7 128 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 MRGPRFQ96AM1 343 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 HPRT1P00492 218 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 OR5AL1P0C617 328 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 PGA4P0DJD7 388 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 RPL27AP46776 148 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 CEBPDP49716 269 aaPredicted RBP12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 AANATQ16613 207 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 RNF212Q495C1 297 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 P2RX4Q99571 388 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 TTRP02766 147 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 FABP4P15090 132 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 STARD4Q96DR4 205 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 SVILO95425 2214 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 MPV17P39210 176 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 EFNB2P52799 333 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 ITLN1Q8WWA0 313 aa12.81□□□□□ -0.36
PCDHA9-202ENST00000532602 P01737 135 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 COL8A1P27658 744 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 ATP5J2P56134 94 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 B2MP61769 119 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 HIST1H3AP68431 136 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 ZXDCQ2QGD7 858 aaPredicted RBP12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 TCTEX1D1Q8N7M0 179 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM222BQ8WU58 562 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 SNX22Q96L94 193 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 SIGLEC12Q96PQ1 595 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 CORTO00230 105 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 RIGQ13278 110 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 HOGA1Q86XE5 327 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 RP1P56715 2156 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 PIKFYVEQ9Y2I7 2098 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 A0A1W2PS18 150 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 HPXP02790 462 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 HTN1P15515 57 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 KCNE5Q9UJ90 142 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 KIAA1324LA8MWY0 1029 aaPredicted RBP12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 CD1AP06126 327 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 SCGB1C2P0DMR2 95 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 G6PCP35575 357 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 FGF12P61328 243 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 SCARF2Q96GP6 870 aaPredicted RBP12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 LINC00052Q96N35 136 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 OR51B2Q9Y5P1 312 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 LMX1BO60663 402 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 TMEM88Q6PEY1 159 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 ZNF826PQ6ZT77 177 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 EIF4E3Q8N5X7 224 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 TMEM37Q8WXS4 190 aa12.8□□□□□ -0.36
PCDHA9-202ENST00000532602 J3KRW8 73 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 OR1K1Q8NGR3 316 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 CHD5Q8TDI0 1954 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 CCKARP32238 428 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 KIR2DL2P43627 348 aaPredicted RBP12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 CAMPP49913 170 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 MIOXQ9UGB7 285 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 SPINK4O60575 86 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 TMEM97Q5BJF2 176 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 A1L4Q6 167 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A10PA6NDY2 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A18PA6NE21 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A16PA6NEW6 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A20PA6NIJ5 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A8PA6NJQ4 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A7PA6NKC0 464 aa12.79□□□□□ -0.36
PCDHA9-202ENST00000532602 FAM90A22PA8MWA6 464 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms