RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 C9orf152Q5JTZ5 239 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 FOXJ2Q9P0K8 574 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 PI4KAP42356 2102 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 PITX3O75364 302 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 CD8AP01732 235 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 UMODP07911 640 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 SNRPEP62304 92 aaKnown RBP13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 PLAC9Q5JTB6 97 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 PHYHD1Q5SRE7 291 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 BSCL2Q96G97 398 aaPredicted RBP13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF665Q9H7R5 613 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ARG1P05089 322 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 PRDX2P32119 198 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ERVFC1-1P60608 527 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 NRIP2Q9BQI9 281 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 WIPI2Q9Y4P8 454 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ANAPC1Q9H1A4 1944 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 CD3EP07766 207 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 NPBWR2P48146 333 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 TREM2Q9NZC2 230 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 SOX15O60248 233 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 TLE1Q04724 770 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 TPRX1Q8N7U7 411 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 RND1Q92730 232 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ISOC2Q96AB3 205 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 FAM210BQ96KR6 192 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF703Q9H7S9 590 aaPredicted RBP13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 SH2D2AQ9NP31 389 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF835Q9Y2P0 537 aa13.2□□□□□ -0.3
PCDHA3-202ENST00000532566 C16orf97H3BN30 126 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 MMP9P14780 707 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 SUCLG1P53597 346 aaKnown RBP13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 PRR27Q6MZM9 219 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 TMEM45BQ96B21 275 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 DAOP14920 347 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 COL10A1Q03692 680 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 WNT2BQ93097 391 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 POM121Q96HA1 1249 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 GNB4Q9HAV0 340 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 ACACAQ13085 2346 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 MGST3O14880 152 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 ATP1A1-AS1Q5TC04 95 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 LAMTOR1Q6IAA8 161 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 TIPARPQ7Z3E1 657 aaKnown RBP13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 CA5BP1Q8WTZ4 195 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 SIGLEC12Q96PQ1 595 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 TOLLIPQ9H0E2 274 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 VAX2Q9UIW0 290 aa13.19□□□□□ -0.3
PCDHA3-202ENST00000532566 BSXQ3C1V8 233 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 ABHD14BQ96IU4 210 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 SYNGR3O43761 229 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 HKR1P10072 659 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 GBF1Q92538 1859 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 hCG_38984A0A1B0GV85 526 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 A0A1W2PN81 502 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 HBZP02008 142 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 CHRNA7P36544 502 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 NPTNQ9Y639 398 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 MUC1P15941 1255 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 GALR1P47211 349 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 PRRX1P54821 245 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 RUNX1Q01196 453 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 CXorf66Q5JRM2 361 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 ASPHD2Q6ICH7 369 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 MRGPRGQ86SM5 289 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 TIMP4Q99727 224 aa13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 OPN3Q9H1Y3 402 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-202ENST00000532566 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 IGHV3OR15-7A0A075B7D8 119 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 DVL1O14640 695 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 HOXA6P31267 233 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 UCP3P55916 312 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 MS4A5Q9H3V2 200 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 NAT8Q9UHE5 227 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 PPIHO43447 177 aaKnown RBP13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 OR8G5Q8NG78 346 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 SMDT1Q9H4I9 107 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms