RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 HSD11B1LQ7Z5J1 315 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 HSD17B13Q7Z5P4 300 aaPredicted RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OOSP2Q86WS3 158 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 C1orf158Q8N1D5 194 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MUC15Q8N387 334 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SPICQ8N5J4 248 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 COX18Q8N8Q8 333 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 PRELID2Q8N945 189 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR51A2Q8NGJ7 313 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR2K2Q8NGT1 345 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR51Q1Q8NH59 317 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR5K1Q8NHB7 308 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MFSD8Q8NHS3 518 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF420Q8TAQ5 688 aaPredicted RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF502Q8TBZ5 544 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF675Q8TD23 568 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CYGBQ8WWM9 190 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MBD3L1Q8WWY6 194 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 IL1F10Q8WWZ1 152 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ACY3Q96HD9 319 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SLC35G5Q96KT7 338 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 FCRL1Q96LA6 429 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 HSFY1Q96LI6 401 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF681Q96N22 645 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OXGR1Q96P68 337 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SCGB3A2Q96PL1 93 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR4K3Q96R72 315 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM59Q9BXS4 323 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 EBPLQ9BY08 206 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SLC25A39Q9BZJ4 359 aaPredicted RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SH3BGRL3Q9H299 93 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CST9LQ9H4G1 147 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 IKZF5Q9H5V7 419 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 NANOGQ9H9S0 305 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 GPR84Q9NQS5 396 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 FAM49BQ9NUQ9 324 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 C14orf105Q9NVL8 296 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SCN3BQ9NY72 215 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TAS2R16Q9NYV7 291 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ERG28Q9UKR5 140 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TBX21Q9UL17 535 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 AP4S1Q9Y587 144 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 U3KQ87 197 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TEX14Q8IWB6 1497 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 FANCD2Q9BXW9 1451 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 NAIPQ13075 1403 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TRAPPC8Q9Y2L5 1435 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 YLPM1P49750 1951 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 PALLDQ8WX93 1383 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 TRAV38-1A0A0B4J264 116 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 IGHV3-35A0A0C4DH35 117 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 IDSB3KWA1 339 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 TRIM49D1C9J1S8 452 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CCL21O00585 134 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 HSD17B6O14756 317 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 MRPS12O15235 138 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RBFOX2O43251 390 aaKnown RBP eCLIP2.5□□□□□ -2.012e-7■■■■■ 43.1
PTPRK-220ENST00000531466 PPIHO43447 177 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CXCL13O43927 109 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GNG7O60262 68 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GCM2O75603 506 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 SCO1O75880 301 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 DHRS3O75911 302 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 KLF8O95600 359 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OPN1SWP03999 348 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 SNRPCP09234 159 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR5G3P0C626 314 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CT45A6P0DMU7 189 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CT45A5P0DMU8 189 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CT45A7P0DMV0 189 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 IL7P13232 177 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 IL1RNP18510 177 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 COX5AP20674 150 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 EVI2AP22794 236 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CDK2P24941 298 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 NPY1RP25929 384 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 APLNRP35414 380 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GNG4P50150 75 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 EMP1P54849 157 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR12D2P58182 307 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF121P58317 390 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RPS14P62263 151 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GNB2P62879 340 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 EIF5AP63241 154 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 SLC35A2P78381 396 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GNA12Q03113 381 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 C4orf26Q17RF5 130 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CT45A1Q5HYN5 189 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM215Q68D42 235 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR10K2Q6IF99 312 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ARL9Q6T311 187 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF620Q6ZNG0 422 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RNF165Q6ZSG1 346 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 MRPL55Q7Z7F7 128 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CALHM3Q86XJ0 350 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 H1FOOQ8IZA3 346 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 UMODL1-AS1Q8N2C9 162 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OSR2Q8N2R0 312 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR2L13Q8N349 312 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms