RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MYOZ3Q8TDC0 251 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 MRPS24Q96EL2 167 aaKnown RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 PELI1Q96FA3 418 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 MRPL48Q96GC5 212 aaKnown RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 CIB1Q99828 191 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 PDCD1LG2Q9BQ51 273 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 ISG20L2Q9H9L3 353 aaKnown RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 RETNQ9HD89 108 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 OR2S2Q9NQN1 319 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 TAS2R4Q9NYW5 299 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 ENOPH1Q9UHY7 261 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 STUB1Q9UNE7 303 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 FOXA2Q9Y261 457 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 STARD9Q9P2P6 4700 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 FAM90A10PA6NDY2 464 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 C12orf77C9JDV5 145 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 HSPA12AO43301 675 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 HLA-DRB1P01911 266 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 HBZP02008 142 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 LRRC36Q1X8D7 754 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 SLC22A6Q4U2R8 563 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 UNQ5815/PRO19632Q6UWF5 114 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 C5orf24Q7Z6I8 188 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 LYPD6Q86Y78 171 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 PARP16Q8N5Y8 322 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 ACBD7Q8N6N7 88 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 C8orf31Q8N9H6 132 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 MINDY2Q8NBR6 621 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 CCDC197Q8NCU1 140 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 FAM103A1Q9BTL3 118 aaKnown RBP7.1□□□□□ -1.27
NEDD8-206ENST00000531430 ALG8Q9BVK2 526 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 MRPL20Q9BYC9 149 aaKnown RBP7.1□□□□□ -1.27
NEDD8-206ENST00000531430 FBXL15Q9H469 300 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 RAB9BQ9NP90 201 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 ETAA1Q9NY74 926 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 KCNIP1Q9NZI2 227 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 AASSQ9UDR5 926 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 POMPQ9Y244 141 aa7.1□□□□□ -1.27
NEDD8-206ENST00000531430 LYSTQ99698 3801 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 A0A1W2PP11 408 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 UBE2QL1A1L167 161 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 E9PI62 339 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 FCN1O00602 326 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 LANCL1O43813 399 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 SOX15O60248 233 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 LY6G6CO95867 125 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 TRGV3P03979 118 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 GSTP1P09211 210 aaKnown RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 RCC1P18754 421 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 FASP25445 335 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF93P35789 620 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 OR3A3P47888 321 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 GBX2P52951 348 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 RBM11P57052 281 aaKnown RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 CX3CL1P78423 397 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ADARB1P78563 741 aaKnown RBP7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ATP6AP1Q15904 470 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ACTBL2Q562R1 376 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 C6orf183Q5T699 404 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 DDI2Q5TDH0 399 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF497Q6ZNH5 498 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 PPP1R27Q86WC6 154 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF439Q8NDP4 499 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 LFNGQ8NES3 379 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 NABP2Q9BQ15 211 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 CST11Q9H112 138 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 TPSG1Q9NRR2 321 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF580Q9UK33 172 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 RNF150Q9ULK6 438 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 FBXO7Q9Y3I1 522 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 PEX16Q9Y5Y5 336 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
NEDD8-206ENST00000531430 C13orf42A0A1B0GVH6 325 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RBMY1BA6NDE4 496 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RBMY1EA6NEQ0 496 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 SAC3D1A6NKF1 404 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 TMEM212A6NML5 194 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 SNTNA6NMZ2 147 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 H0Y980 276 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 H7C2Y5 167 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 IGLV1-51P01701 117 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 CD2P06729 351 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RBMY1DP0C7P1 496 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 GTF2F2P13984 249 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 PPP1CCP36873 323 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 GTF2A1P52655 376 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 PPP3R1P63098 170 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 PAX5Q02548 391 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RAB40BQ12829 278 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 GNMTQ14749 295 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 MPV17LQ2QL34 196 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 ZIK1Q3SY52 487 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 DNAL1Q4LDG9 190 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 MORN2Q502X0 79 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 ZNF660Q6AZW8 331 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RAB12Q6IQ22 244 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 ASCL4Q6XD76 172 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms