RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 FAM172BPA6NC97 362 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 J3QR06 171 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 FCGR3AP08637 254 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 DTYMKP23919 212 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 CEACAM3P40198 252 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 MNDAP41218 407 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 KIR2DS4P43632 304 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 GNG2P59768 71 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 KIR2DS1Q14954 304 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 AANATQ16613 207 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 LY6G6FQ5SQ64 297 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 Q6ZPA2 131 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 UBALD1Q8TB05 177 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 DYNC2LI1Q8TCX1 351 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
CCS-206ENST00000530961 NDUFA13Q9P0J0 144 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 RSL24D1Q9UHA3 163 aaKnown RBP12.4□□□□□ -0.42
CCS-206ENST00000530961 AMMECR1Q9Y4X0 333 aaPredicted RBP12.4□□□□□ -0.42
CCS-206ENST00000530961 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 ARHGAP32A7KAX9 2087 aa12.4□□□□□ -0.42
CCS-206ENST00000530961 TMEM235A6NFC5 223 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 TRIM77I1YAP6 450 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 YPEL1O60688 119 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 RGS11O94810 467 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 VENTXO95231 258 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 TMEM69Q5SWH9 247 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 Q6ZS49 121 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 LHFPL4Q7Z7J7 247 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 ZDHHC22Q8N966 263 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 ZFAND2BQ8WV99 257 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 RBM38Q9H0Z9 239 aaKnown RBP12.39□□□□□ -0.43
CCS-206ENST00000530961 AUNIPQ9H7T9 357 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 ZNRD1Q9P1U0 126 aa12.39□□□□□ -0.43
CCS-206ENST00000530961 IGHV3-43A0A0B4J1X8 118 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 HOXA3O43365 443 aaPredicted RBP12.38□□□□□ -0.43
CCS-206ENST00000530961 DIRAS3O95661 229 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 IGHV3-43DP0DP04 118 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 ZBTB25P24278 435 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 IER3P46695 156 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 SLC9A3R2Q15599 337 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 SSX2Q16385 188 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 MORN2Q502X0 79 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 UTF1Q5T230 341 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 OR5R1Q8NH85 324 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 LEAP2Q969E1 77 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 OCSTAMPQ9BR26 566 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 C19orf24Q9BVV8 132 aa12.38□□□□□ -0.43
CCS-206ENST00000530961 ELF5Q9UKW6 265 aaPredicted RBP12.38□□□□□ -0.43
CCS-206ENST00000530961 DNAJC9-AS1A6NH13 148 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 LY6LH3BQJ8 138 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 FABP7O15540 132 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 HPGDSO60760 199 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 TPPPO94811 219 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 IGHV3-7P01780 117 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 EIF4EP06730 217 aaKnown RBP12.37□□□□□ -0.43
CCS-206ENST00000530961 SCTP09683 121 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 GNG10P50151 68 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 DYNLT3P51808 116 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 ARHGDIBP52566 201 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
CCS-206ENST00000530961 LDLRAD2Q5SZI1 272 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
CCS-206ENST00000530961 IZUMO1Q8IYV9 350 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 OR52L2PQ8NGH6 319 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 OR10V1Q8NGI7 309 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 ST6GALNAC5Q9BVH7 336 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 ESM1Q9NQ30 184 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 ZNF230Q9UIE0 474 aaPredicted RBP12.37□□□□□ -0.43
CCS-206ENST00000530961 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
CCS-206ENST00000530961 FAM25AB3EWG3 89 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 FAM25CB3EWG5 89 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 FAM25GB3EWG6 89 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 ITGB1BP1O14713 200 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 HSPA12AO43301 675 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
CCS-206ENST00000530961 CTXN2P0C2S0 81 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 ELK1P19419 428 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 IL3RAP26951 378 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 CBX5P45973 191 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 TAS2R20P59543 309 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms