RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ADAMTSL3P82987 1691 aa2.72□□□□□ -1.97
CASP4-208ENST00000530309 NFAT5O94916 1531 aa2.72□□□□□ -1.97
CASP4-208ENST00000530309 CPDO75976 1380 aa2.72□□□□□ -1.97
CASP4-208ENST00000530309 PIK3C2BO00750 1634 aa2.71□□□□□ -1.97
CASP4-208ENST00000530309 SHBGP04278 402 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CGB3P0DN86 165 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CGB7P0DN87 165 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 ZNF708P17019 499 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CRABP2P29373 138 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 RELAQ04206 551 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 TNFRSF9Q07011 255 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 TRIP13Q15645 432 aaPredicted RBP2.71□□□□□ -1.98
CASP4-208ENST00000530309 NDUFA5Q16718 116 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 GOLGA7BQ2TAP0 167 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 NXNL2Q5VZ03 156 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 SMARCD3Q6STE5 483 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 Q6ZT83 130 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CDRT4Q8N9R6 151 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 ZNF738Q8NE65 137 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 OR2AE1Q8NHA4 323 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 MUC7Q8TAX7 377 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CASTOR1Q8WTX7 329 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 NAT14Q8WUY8 206 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 DNAJC9Q8WXX5 260 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 IFT81Q8WYA0 676 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 APOBEC3DQ96AK3 386 aaPredicted RBP2.71□□□□□ -1.98
CASP4-208ENST00000530309 DGCR14Q96DF8 476 aaKnown RBP2.71□□□□□ -1.98
CASP4-208ENST00000530309 VCX3BQ9H321 246 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 CENPHQ9H3R5 247 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 GOLPH3Q9H4A6 298 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 UBAP1Q9NZ09 502 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 FAM32AQ9Y421 112 aaKnown RBP2.71□□□□□ -1.98
CASP4-208ENST00000530309 FADS3Q9Y5Q0 445 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 USH1CQ9Y6N9 552 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 LRRC37A3O60309 1634 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 RGPD1P0DJD0 1748 aa2.71□□□□□ -1.98
CASP4-208ENST00000530309 ZNF609O15014 1411 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 EDC4Q6P2E9 1401 aaKnown RBP2.7□□□□□ -1.98
CASP4-208ENST00000530309 LOC100506127A0A0U1RQW1 187 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 H3BMM0 161 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 PLPP3O14495 311 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 UBDO15205 165 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 ATP5HO75947 161 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 APOA1P02647 267 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 RPA3P35244 121 aaPredicted RBP2.7□□□□□ -1.98
CASP4-208ENST00000530309 ETV1P50549 477 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 RAP1GDS1P52306 607 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 RAB25P57735 213 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 HBG1P69891 147 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 HBG2P69892 147 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 APOFQ13790 326 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 PSG3Q16557 428 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 Q3ZCU0 254 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 CCDC153Q494R4 210 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 MARCH3Q86UD3 253 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 OR2Y1Q8NGV0 311 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 TMEM239Q8WW34 195 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 MAL2Q969L2 176 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 UBE2WQ96B02 151 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 SLC25A44Q96H78 314 aaPredicted RBP2.7□□□□□ -1.98
CASP4-208ENST00000530309 TRIB3Q96RU7 358 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 SAR1AQ9NR31 198 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 AGPAT3Q9NRZ7 376 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 PAIP2BQ9ULR5 123 aaKnown RBP2.7□□□□□ -1.98
CASP4-208ENST00000530309 ARL2BPQ9Y2Y0 163 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 TMEM131Q92545 1883 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 CAMSAP1Q5T5Y3 1602 aa2.7□□□□□ -1.98
CASP4-208ENST00000530309 TMEM131LA2VDJ0 1609 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 IGLV10-54A0A075B6I4 117 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 LOC105371267A0A1B0GV96 52 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 H3BQV1 296 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CDIPTO14735 213 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 SLC22A1O15245 554 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 PDCD6O75340 191 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CA2P00918 260 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CST4P01036 141 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 PDYNP01213 254 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 PLTPP55058 493 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 UBE2KP61086 200 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 MAGOHP61326 146 aaKnown RBP2.69□□□□□ -1.98
CASP4-208ENST00000530309 DHRS2Q13268 280 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CEACAM21Q3KPI0 293 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CCDC122Q5T0U0 273 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 CYHR1Q6ZMK1 362 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 LYZL2Q7Z4W2 148 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 C10orf107Q8IVU9 208 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 MAGOHBQ96A72 148 aaKnown RBP2.69□□□□□ -1.98
CASP4-208ENST00000530309 LRRC45Q96CN5 670 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 MFSD1Q9H3U5 465 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 METTL8Q9H825 291 aaKnown RBP2.69□□□□□ -1.98
CASP4-208ENST00000530309 GUCA1BQ9UMX6 200 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 HEY1Q9Y5J3 304 aa2.69□□□□□ -1.98
CASP4-208ENST00000530309 ABCB11O95342 1321 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 ARHGEF28Q8N1W1 1705 aaKnown RBP2.68□□□□□ -1.98
CASP4-208ENST00000530309 ZSWIM8A7E2V4 1837 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 IGHV1-45A0A0A0MS14 117 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 IGHV2-26A0A0B4J1V2 119 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 E7EQL1 145 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 SLC31A1O15431 190 aa2.68□□□□□ -1.98
CASP4-208ENST00000530309 DENRO43583 198 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms