RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 TMEM222Q9H0R3 208 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 BEX4Q9NWD9 120 aaPredicted RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 TRAPPC2LQ9UL33 140 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 ZNF407Q9C0G0 2248 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TRAV24A0A0B4J272 114 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 A0A1W2PR80 420 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 RNF212BA8MTL3 300 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 MPTX1A8MV57 137 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 A8MXK9 166 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 NPIPB11E5RHQ5 1161 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 HSPB6O14558 160 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 GRPP07492 148 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 SCTP09683 121 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 HKR1P10072 659 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 P2RY1P47900 373 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 ERVK11-1P61568 191 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 BLOC1S1P78537 153 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 PSG7Q13046 419 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 ZNF146Q15072 292 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TSC22D1Q15714 1073 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 SP6Q3SY56 376 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 Q6P435 159 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 CXorf67Q86X51 503 aaPredicted RBP9.93□□□□□ -0.82
USF1-208ENST00000528768 STPG2Q8N412 459 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 ZNF610Q8N9Z0 462 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 RELL2Q8NC24 303 aaPredicted RBP9.93□□□□□ -0.82
USF1-208ENST00000528768 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 ARL11Q969Q4 196 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 MARC2Q969Z3 335 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 MSI2Q96DH6 328 aaKnown RBP9.93□□□□□ -0.82
USF1-208ENST00000528768 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
USF1-208ENST00000528768 CYYR1Q96J86 154 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 ZNF488Q96MN9 340 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TMEM56Q96MV1 263 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
USF1-208ENST00000528768 CABLES2Q9BTV7 478 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TAAR3PQ9P1P4 343 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 OR2W1Q9Y3N9 320 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 TMEM56-RWDD3S4R434 201 aa9.93□□□□□ -0.82
USF1-208ENST00000528768 DNAJC13O75165 2243 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 VPS13CQ709C8 3753 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 HRNRQ86YZ3 2850 aaPredicted RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 TMEM30CPA0ZSE6 113 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 H0Y980 276 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 ZNHIT1O43257 154 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 HSPA12AO43301 675 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 FGF16O43320 207 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 LILRA1O75019 489 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 RHBDL1O75783 438 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 LY6G6DO95868 133 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 IGLV1-44P01699 117 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 MMP9P14780 707 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 GNRHRP30968 328 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 VAMP2P63027 116 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 DAZAP2Q15038 168 aaPredicted RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 MBNL2Q5VZF2 373 aaKnown RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 LYZL2Q7Z4W2 148 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 LDLRAD3Q86YD5 345 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 H1FOOQ8IZA3 346 aaPredicted RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 OR5D13Q8NGL4 314 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 SUN5Q8TC36 379 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 STARD4Q96DR4 205 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 MUCL1Q96DR8 90 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 RRNAD1Q96FB5 475 aaKnown RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 SFXN3Q9BWM7 321 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 SLC25A31Q9H0C2 315 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 TAF9BQ9HBM6 251 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 CYTL1Q9NRR1 136 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 RBM7Q9Y580 266 aaKnown RBP9.92□□□□□ -0.82
USF1-208ENST00000528768 POMT1Q9Y6A1 747 aa9.92□□□□□ -0.82
USF1-208ENST00000528768 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 A6NLC8 198 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 SIRPB1O00241 398 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 CDIPTO14735 213 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 HSD17B6O14756 317 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 TNFSF13O75888 250 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 OR2H2O95918 312 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 HAND1O96004 215 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 CGAP01215 116 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 WNT2P09544 360 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 CECR9P0C854 216 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 VDAC1P21796 283 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 UCP1P25874 307 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 TIMP3P35625 211 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 SELENOVP59797 346 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
USF1-208ENST00000528768 NKX6-1P78426 367 aaPredicted RBP9.91□□□□□ -0.82
USF1-208ENST00000528768 ZNF154Q13106 437 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 FAM74A1Q5RGS3 127 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 TIMM23BQ5SRD1 257 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 TRAT1Q6PIZ9 186 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 IL34Q6ZMJ4 242 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 ZNF497Q6ZNH5 498 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 GAPTQ8N292 157 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 OR10V1Q8NGI7 309 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms