RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 EMX1Q04741 257 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-216ENST00000528739 UNC119Q13432 240 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 FBLN7Q53RD9 439 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 KHDC1LQ5JSQ8 128 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 C5orf24Q7Z6I8 188 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 MRPL30Q8TCC3 161 aaKnown RBP11.41□□□□□ -0.58
CAPN1-216ENST00000528739 GALMQ96C23 342 aa11.41□□□□□ -0.58
CAPN1-216ENST00000528739 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 SOCS1O15524 211 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 RGS11O94810 467 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 VEGFCP49767 419 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 DEFA6Q01524 100 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 ZNF816Q0VGE8 651 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-216ENST00000528739 SSX1Q16384 188 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 C2orf76Q3KRA6 126 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 TGIF2LXQ8IUE1 241 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 CFHR4Q92496 578 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 FAM3DQ96BQ1 224 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 GFI1Q99684 422 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-216ENST00000528739 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 LRRC42Q9Y546 428 aa11.4□□□□□ -0.58
CAPN1-216ENST00000528739 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 PPP1CCP36873 323 aaKnown RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 MRPS15P82914 257 aaKnown RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 GNMTQ14749 295 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 MORN2Q502X0 79 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 C22orf42Q6IC83 251 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 GAPTQ8N292 157 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 OR2T10Q8NGZ9 312 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 RTN4IP1Q8WWV3 396 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 WNT10AQ9GZT5 417 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 LPAR5Q9H1C0 372 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 MBNL3Q9NUK0 354 aaKnown RBP11.39□□□□□ -0.59
CAPN1-216ENST00000528739 STEAP1Q9UHE8 339 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 JPT1Q9UK76 154 aa11.39□□□□□ -0.59
CAPN1-216ENST00000528739 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
CAPN1-216ENST00000528739 RAB3BP20337 219 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF134P52741 427 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 OR10A3P58181 314 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 QRFPP83859 136 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 Q3ZCU0 254 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 C1QL4Q86Z23 238 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 SPARTQ8N0X7 666 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 OR56B1Q8NGI3 324 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 EAF1Q96JC9 268 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-216ENST00000528739 ABHD14AQ9BUJ0 271 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 YTHDF1Q9BYJ9 559 aaKnown RBP11.38□□□□□ -0.59
CAPN1-216ENST00000528739 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 AK3Q9UIJ7 227 aa11.38□□□□□ -0.59
CAPN1-216ENST00000528739 A0A0A6YYD4 124 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 TRDV1A0A1B0GX56 115 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 SMIM30A4D0T7 59 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 HSPA12AO43301 675 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 TXNL1O43396 289 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 PF4V1P10720 104 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 HTD2P86397 168 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF554Q86TJ5 538 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 OR2AK2Q8NG84 335 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 OR4F17Q8NGA8 305 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 FCGR1BQ92637 280 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 ARHGAP5-AS1Q96IT6 56 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 RASL11BQ9BPW5 248 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 CMSS1Q9BQ75 279 aaKnown RBP11.37□□□□□ -0.59
CAPN1-216ENST00000528739 HDHD3Q9BSH5 251 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-216ENST00000528739 RIMS4Q9H426 269 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-216ENST00000528739 RAB22AQ9UL26 194 aa11.37□□□□□ -0.59
CAPN1-216ENST00000528739 RRP15Q9Y3B9 282 aaKnown RBP11.37□□□□□ -0.59
CAPN1-216ENST00000528739 TET2Q6N021 2002 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-216ENST00000528739 A0A075B6Q4 140 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 TMEM272A0A1B0GTI8 110 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF736B4DX44 427 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-216ENST00000528739 FGF16O43320 207 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 YPEL1O60688 119 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 MOSP00540 346 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 OPN1MWP04001 364 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 AMY1AP04745 511 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 AMY2AP04746 511 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 OPN1MW2P0DN77 364 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 OPN1MW3P0DN78 364 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 CD37P11049 281 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 CD1BP29016 333 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 HMGN3Q15651 99 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms