RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CEBPDP49716 269 aaPredicted RBP12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 TMEM33P57088 247 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 TNFAIP6P98066 277 aaPredicted RBP12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 VHLLQ6RSH7 139 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 PRR18Q8N4B5 295 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 ZNF561Q8N587 486 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 CD177Q8N6Q3 437 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 RELL2Q8NC24 303 aaPredicted RBP12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM222BQ8WU58 562 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 DMRTA2Q96SC8 542 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 APC2O95996 2303 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 CHD3Q12873 2000 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 A8MXK9 166 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 CD55P08174 381 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 OR8U9P0C7N5 309 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 VAMP2P63027 116 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 KLRB1Q12918 225 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 CATR1Q13166 79 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 UQCC3Q6UW78 93 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 MOGAT3Q86VF5 341 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 EDARADDQ8WWZ3 215 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 CXorf58Q96LI9 332 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 RCL1Q9Y2P8 373 aaKnown RBP12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 IGKV1D-17A0A075B6S4 117 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 TRAV39A0A0B4J263 110 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 TEX46H3BTG2 121 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 K7N7A8 449 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 KCNAB3O43448 404 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 ADAM20O43506 726 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 IGLV2-14P01704 120 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 IGHV1-46P01743 117 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM87AP0C7U9 286 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 IRF2P14316 349 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 ZP3P21754 424 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 CCKARP32238 428 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 BLOC1S1P78537 153 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 ZNF66Q6ZN08 573 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 GALNT11Q8NCW6 608 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 OR1L1Q8NH94 360 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 C11orf1Q9H5F2 150 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 OR6C3Q9NZP0 311 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 FBXL17Q9UF56 701 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 KCNS2Q9ULS6 477 aa12.37□□□□□ -0.43
ECHDC1-220ENST00000528402 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 DPRXA6NFQ7 191 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 WRBO00258 174 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 ITGB1BP1O14713 200 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 TNFSF12O43508 249 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 PITX3O75364 302 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 MUC1P15941 1255 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 EGR1P18146 543 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 GLIPR1P48060 266 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 BAXQ07812 192 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 TMEM30BQ3MIR4 351 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 STPG2Q8N412 459 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 OR2C3Q8N628 320 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 MRGPRDQ8TDS7 321 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 ARL11Q969Q4 196 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 OR2S2Q9NQN1 319 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
ECHDC1-220ENST00000528402 ODAMA1E959 279 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 LRRC30A6NM36 301 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM90A26D6RGX4 464 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 ABCD4O14678 606 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 SEC11BP0C7V7 166 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 SFTPCP11686 197 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 ASCL1P50553 236 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 ST6GALNAC3Q8NDV1 305 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 CD300LFQ8TDQ1 290 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 EGLN1Q9GZT9 426 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 ESRP2Q9H6T0 727 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 GCM1Q9NP62 436 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms