RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ARV1Q9H2C2 271 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 OR51B5Q9H339 312 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ZSCAN16Q9H4T2 348 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 METTL17Q9H7H0 456 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 CXorf21Q9HAI6 301 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 NMNAT1Q9HAN9 279 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 PARVBQ9HBI1 364 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 C8orf17Q9NRJ1 99 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 HEBP1Q9NRV9 189 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 RBM22Q9NW64 420 aaKnown RBP eCLIP0.78□□□□□ -2.287e-6■■■■□ 24.6
ECHDC1-219ENST00000526299 IL37Q9NZH6 218 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 GSKIPQ9P0R6 139 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 DOK5Q9P104 306 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SIGLEC7Q9Y286 467 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 PKIGQ9Y2B9 76 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF257Q9Y2Q1 563 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 KLF12Q9Y4X4 402 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 INSIG2Q9Y5U4 225 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC22A7Q9Y694 548 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SDK2Q58EX2 2172 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 MTUS2Q5JR59 1369 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SHANK1Q9Y566 2161 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IGHV6-1A0A0B4J1U7 121 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IGHV2OR16-5A0A0B4J2B6 119 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A0B4J2E0 115 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TINCRA0A1B0GVN0 87 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC5A10A0PJK1 596 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ANKRD20A5PA0PJZ0 165 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM72A0PK05 275 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 C5orf63A6NC05 138 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CLDN24A6NM45 220 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF99A8MXY4 864 aaPredicted RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 LEUTXA8MZ59 168 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 LINC01619G3V211 115 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 RNASEK-C17orf49H0YIS7 233 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 M0R1B8 84 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CXCR6O00574 342 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 MFNGO00587 321 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TXNDC9O14530 226 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 AZIN1O14977 448 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ACOX3O15254 700 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CRXO43186 299 aaPredicted RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 NDUFS5O43920 106 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 PDE6DO43924 150 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 NOS1APO75052 506 aaPredicted RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 POP7O75817 140 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2A4O95047 310 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 S1PR2O95136 353 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CXorf1O96002 111 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IGLV3-25P01717 112 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IGHV1-46P01743 117 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IGLV7-43P04211 117 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TCRBP04435 133 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 IFNA16P05015 189 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 REG1AP05451 166 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 GP1BAP07359 652 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 OR4E1P0C645 316 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 LINC00614P0C842 121 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 GABRA1P14867 456 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 LGALS3P17931 250 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 GABRG2P18507 467 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TAC1P20366 129 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 PRPS1L1P21108 318 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 PRTN3P24158 256 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ERP29P30040 261 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC6A1P30531 599 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 S100A7P31151 101 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CD70P32970 193 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 MAP2K4P45985 399 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TTPAP49638 278 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 EIF2B2P49770 351 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 SULT1A1P50225 295 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 RAB38P57729 211 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 B2MP61769 119 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 POLR2GP62487 172 aaKnown RBP eCLIP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CTAG1AP78358 180 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 HPCAP84074 193 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ATP5G2Q06055 141 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 INCA1Q0VD86 236 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 FABP9Q0Z7S8 132 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 PRDX4Q13162 271 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 MED21Q13503 144 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 CDK10Q15131 360 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 KCNJ8Q15842 424 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 BATFQ16520 125 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 PSG3Q16557 428 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 MOGQ16653 247 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 WHAMMP3Q1A5X7 153 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM241Q24JQ0 296 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 RGS21Q2M5E4 152 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 ACTL10Q5JWF8 245 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 SAMD13Q5VXD3 122 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM104BQ5XKR9 115 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 KCTD16Q68DU8 428 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TNFAIP8L2Q6P589 184 aaPredicted RBP0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 SMARCD3Q6STE5 483 aa0.77□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM205Q6UW68 189 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms