RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MXD1Q05195 221 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 NRF1Q16656 503 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 KLHL12Q53G59 568 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 NHLRC3Q5JS37 347 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 OTPQ5XKR4 325 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 TMEM215Q68D42 235 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 Q6ZN92 141 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 RDH10Q8IZV5 341 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 LRRC18Q8N456 261 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 TMEM105Q8N8V8 129 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 OR10G9Q8NGN4 311 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 C9orf85Q96MD7 179 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 PFDN5Q99471 154 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 CMSS1Q9BQ75 279 aaKnown RBP3.61□□□□□ -1.83
CD44-220ENST00000525688 TAPBPLQ9BX59 468 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 KCNJ16Q9NPI9 418 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 DKKL1Q9UK85 242 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 DNAJC12Q9UKB3 198 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 ANGPT4Q9Y264 503 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 ST3GAL6Q9Y274 331 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.61□□□□□ -1.83
CD44-220ENST00000525688 ANAPC1Q9H1A4 1944 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 ZNF638Q14966 1978 aaKnown RBP3.61□□□□□ -1.83
CD44-220ENST00000525688 ZFHX2Q9C0A1 2572 aaPredicted RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 KIF26AQ9ULI4 1882 aaPredicted RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 SHISA9B4DS77 424 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 TRIM49D1C9J1S8 452 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 H7C1H1 209 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 K7ENP7 123 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 M0QYV0 167 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 UPK1BO75841 260 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OR7C1O76099 320 aaPredicted RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 ATG12O94817 140 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 MT-CO2P00403 227 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 IGKV1D-16P01601 117 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 SERPINA7P05543 415 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OR10J4P0C629 311 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 IFI30P13284 250 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 PSMB1P20618 241 aaKnown RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 GZMHP20718 246 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 CXCR1P25024 350 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 SERPINB5P36952 375 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 TAS2R43P59537 309 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 HIST1H3AP68431 136 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 H3F3AP84243 136 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 RUNX3Q13761 415 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 PDGFRLQ15198 375 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 CEACAM16Q2WEN9 425 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 FAM78BQ5VT40 261 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OR10K2Q6IF99 312 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 FAM183BPQ6ZVS7 135 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 HIST2H3AQ71DI3 136 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 CBR4Q8N4T8 237 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 ZFP41Q8N8Y5 198 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OR2M7Q8NG81 312 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OR6N1Q8NGY5 312 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 LHFPL5Q8TAF8 219 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 AGAP11Q8TF27 550 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 ITLN1Q8WWA0 313 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 TAMM41Q96BW9 452 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 PGLYRP4Q96LB8 373 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 ARHGDIGQ99819 225 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 SULT4A1Q9BR01 284 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 GINS3Q9BRX5 216 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 KIFC1Q9BW19 673 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 WFDC1Q9HC57 220 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 ENY2Q9NPA8 101 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 HEBP1Q9NRV9 189 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 CALYQ9NYX4 217 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 DOK5Q9P104 306 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 OPTCQ9UBM4 332 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 POLR1DQ9Y2S0 133 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 CARHSP1Q9Y2V2 147 aaKnown RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 FAM32AQ9Y421 112 aaKnown RBP3.6□□□□□ -1.83
CD44-220ENST00000525688 ASB4Q9Y574 426 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 KMT2EQ8IZD2 1858 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 PCNX3Q9H6A9 2034 aa3.6□□□□□ -1.83
CD44-220ENST00000525688 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 A0A1B0GV90 55 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 TRABD2BA6NFA1 517 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 ATP6V1G2-DDX39BF2Z307 99 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 GALR3O60755 368 aaPredicted RBP3.59□□□□□ -1.83
CD44-220ENST00000525688 STK16O75716 305 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 AIFM1O95831 613 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 P01737 135 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
CD44-220ENST00000525688 OMGP23515 440 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 PSMB9P28065 219 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 MYCNOSP40205 109 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 OR1E2P47887 323 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
CD44-220ENST00000525688 KLK7P49862 253 aa3.59□□□□□ -1.83
CD44-220ENST00000525688 CCR6P51684 374 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms