RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CR1LQ2VPA4 569 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 LGALSLQ3ZCW2 172 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-212ENST00000524330 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TMEM268Q5VZI3 342 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 GGNBP1Q5YKI7 109 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 LAMTOR1Q6IAA8 161 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 MEX3BQ6ZN04 569 aaKnown RBP8.34□□□□□ -1.07
VPS13B-212ENST00000524330 ZNF66Q6ZN08 573 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 Q6ZPA2 131 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 ZNF818PQ6ZRF7 136 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 LDLRAD3Q86YD5 345 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 DEFB108BQ8NET1 73 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 OR11H4Q8NGC9 324 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 OR10A7Q8NGE5 316 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 OR1L1Q8NH94 360 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 CD300LFQ8TDQ1 290 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-212ENST00000524330 DCUN1D4Q92564 292 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 CCL17Q92583 94 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 RBPMSQ93062 196 aaKnown RBP8.34□□□□□ -1.07
VPS13B-212ENST00000524330 WDR89Q96FK6 387 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TIMD4Q96H15 378 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TMEM56Q96MV1 263 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TMEM204Q9BSN7 226 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 SHARPINQ9H0F6 387 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 ARL6Q9H0F7 186 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 GAL3ST2Q9H3Q3 398 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 PLSCR3Q9NRY6 295 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 CBLN4Q9NTU7 201 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TAS2R3Q9NYW6 316 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 LAMP3Q9UQV4 416 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 MAB21L2Q9Y586 359 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 TMEM56-RWDD3S4R434 201 aa8.34□□□□□ -1.07
VPS13B-212ENST00000524330 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 YPEL1O60688 119 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 ADAP1O75689 374 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 GYPAP02724 150 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 OR8U9P0C7N5 309 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 NDUFB7P17568 137 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 VDAC1P21796 283 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 S100A10P60903 97 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 UBA52P62987 128 aaKnown RBP8.33□□□□□ -1.08
VPS13B-212ENST00000524330 SP6Q3SY56 376 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 SLC51BQ86UW2 128 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 OR52M1Q8NGK5 317 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 OR13A1Q8NGR1 328 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 OR8U1Q8NH10 309 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 CORO2AQ92828 525 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 MSI2Q96DH6 328 aaKnown RBP8.33□□□□□ -1.08
VPS13B-212ENST00000524330 RRNAD1Q96FB5 475 aaKnown RBP8.33□□□□□ -1.08
VPS13B-212ENST00000524330 CYYR1Q96J86 154 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 C18orf12Q96KH6 178 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 GAFA1Q96PS6 74 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 HSD17B10Q99714 261 aaKnown RBP8.33□□□□□ -1.08
VPS13B-212ENST00000524330 PLEKHA2Q9HB19 425 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 CALYQ9NYX4 217 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 OR1A1Q9P1Q5 309 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 UBQLN2Q9UHD9 624 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
VPS13B-212ENST00000524330 MAP1BP46821 2468 aaKnown RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 RP1L1Q8IWN7 2480 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 TRAV39A0A0B4J263 110 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 KBTBD11-OT1A0A1B0GTJ5 212 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 DEFB108AA8MXU0 73 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 E5RGE8 158 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 G3V3Q6 166 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 F2RL2O00254 374 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 WRBO00258 174 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 TAAR5O14804 337 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 GPR37O15354 613 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 TMPRSS2O15393 492 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ST8SIA3O43173 380 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF205O95201 554 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 SLC25A6P12236 298 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 KIR2DS2P43631 304 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 GPR12P47775 334 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 AP2S1P53680 142 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 MRPS11P82912 194 aaKnown RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ZNRF1Q8ND25 227 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 OR52L2PQ8NGH6 319 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ITLN2Q8WWU7 325 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 RAB1CQ92928 201 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CNTNAP3BQ96NU0 1288 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CCL13Q99616 98 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 ARPC5LQ9BPX5 153 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CNTNAP3Q9BZ76 1288 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 SLC25A10Q9UBX3 287 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CLN8Q9UBY8 286 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 NSG2Q9Y328 171 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms