RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MED27Q6P2C8 311 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 LINC00336Q6ZUF6 198 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 CALHM3Q86XJ0 350 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 FAM9CQ8IZT9 166 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 ORMDL3Q8N138 153 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 CD200R1Q8TD46 325 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 SKA2Q8WVK7 121 aaPredicted RBP2.17□□□□□ -2.06
SKP1-212ENST00000523966 C10orf82Q8WW14 230 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 WDR34Q96EX3 536 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 GABRG3Q99928 467 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 OR2AG1Q9H205 316 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 ARV1Q9H2C2 271 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 PRO3102Q9H379 93 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 POMKQ9H5K3 350 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 KIR3DX1Q9H7L2 352 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 PARVBQ9HBI1 364 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 MRPL40Q9NQ50 206 aaKnown RBP2.17□□□□□ -2.06
SKP1-212ENST00000523966 ZMAT5Q9UDW3 170 aaKnown RBP2.17□□□□□ -2.06
SKP1-212ENST00000523966 KPTNQ9Y664 436 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 MTCH2Q9Y6C9 303 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 C2orf16Q68DN1 1984 aa2.17□□□□□ -2.06
SKP1-212ENST00000523966 NUP214P35658 2090 aaPredicted RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 GBF1Q92538 1859 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TRANK1O15050 2925 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TRAV8-6A0A0B4J262 113 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 MGAT4DA6NG13 374 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 A8MT66 165 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 A8MUU9 505 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 K7EQS6 105 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 AZIN1O14977 448 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 UBDO15205 165 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 GYG2O15488 501 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 OR7C2O60412 319 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 NIPSNAP2O75323 286 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 STK16O75716 305 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 POP7O75817 140 aaKnown RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 RPS17P08708 135 aaKnown RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 STAG3L2P0CL84 134 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 HLA-EP13747 358 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 IDO1P14902 403 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 P2RY2P41231 377 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 PSMD8P48556 350 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 STX5Q13190 355 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 MAD2L1BPQ15013 274 aaPredicted RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 OR4D1Q15615 310 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TSNQ15631 228 aaKnown RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 DNAL1Q4LDG9 190 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 CPTPQ5TA50 214 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 DEGS2Q6QHC5 323 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 EPGNQ6UW88 154 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 SBSNQ6UWP8 590 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 CYHR1Q6ZMK1 362 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 ZCCHC23Q6ZST2 131 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TRAPPC5Q8IUR0 188 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 CPNE9Q8IYJ1 553 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 ZNF101Q8IZC7 436 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 SLC35G3Q8N808 338 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 OR51L1Q8NGJ5 315 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 EEF1AKMT1Q8WVE0 214 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 BAALCQ8WXS3 180 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TMEM234Q8WY98 164 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 FAM131CQ96AQ9 280 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 RAD51AP1Q96B01 352 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 C19orf60Q96EN9 201 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 C18orf15Q96N68 181 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 SERPINI1Q99574 410 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TSNAXQ99598 290 aaKnown RBP2.16□□□□□ -2.06
SKP1-212ENST00000523966 C20orf27Q9GZN8 174 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 PCBD2Q9H0N5 130 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 EFCAB1Q9HAE3 211 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 FBXL12Q9NXK8 326 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 OPTCQ9UBM4 332 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 RAB22AQ9UL26 194 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 FADS3Q9Y5Q0 445 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 ENPP4Q9Y6X5 453 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 CHD9Q3L8U1 2897 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 LAMA3Q16787 3333 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 CACNA1EQ15878 2313 aa2.16□□□□□ -2.06
SKP1-212ENST00000523966 PI4KAP42356 2102 aa2.15□□□□□ -2.06
SKP1-212ENST00000523966 HEATR5BQ9P2D3 2071 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 IGHV2OR16-5A0A0B4J2B6 119 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 SLC5A10A0PJK1 596 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 OR6C70A6NIJ9 312 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 IQCF5A8MTL0 148 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 BBIP1A8MTZ0 92 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 K7EM74 188 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 PSMD12O00232 456 aaPredicted RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 MFNGO00587 321 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 PSIP1O75475 530 aaKnown RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 SOD1P00441 154 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 NPPAP01160 153 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 CD5P06127 495 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 NQO1P15559 274 aaKnown RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 CELP19835 753 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 NTF3P20783 257 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 SERPINB1P30740 379 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms