RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 IGHV3-43DP0DP04 118 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 ASCL1P50553 236 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 DYNLT3P51808 116 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 MSL2Q9HCI7 577 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 FUT9Q9Y231 359 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 NPTNQ9Y639 398 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 MYOFQ9NZM1 2061 aa14.08□□□□□ -0.15
USP42-207ENST00000521713 A0A0U1RQV5 110 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 CXorf65A6NEN9 183 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PSG4Q00888 419 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 OR10AC1Q8NH08 325 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 ZNF519Q8TB69 540 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 SFXN3Q9BWM7 321 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 CACNG5Q9UF02 275 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PPOXP50336 477 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 ATP1A1-AS1Q5TC04 95 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 DHRS7BQ6IAN0 325 aaPredicted RBP14.08□□□□□ -0.16
USP42-207ENST00000521713 SLC25A22Q9H936 323 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PPIAL4EA0A075B759 164 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PPIAL4DF5H284 164 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 LANCL1O43813 399 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PPIAL4FP0DN26 164 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 LIMS1P48059 325 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 UCP2P55851 309 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 PPIAL4AQ9Y536 164 aa14.08□□□□□ -0.16
USP42-207ENST00000521713 ARID2Q68CP9 1835 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 RPS4Y1P22090 263 aaKnown RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 HTR1DP28221 377 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 GUCA2BQ16661 112 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 MEX3AA1L020 520 aaKnown RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 GEMIN2O14893 280 aaKnown RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 SYNGR2O43760 224 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 OR4A8P0C604 315 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 H1FOOQ8IZA3 346 aaPredicted RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 SH2D2AQ9NP31 389 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 RIF1Q5UIP0 2472 aaKnown RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 TCF21O43680 179 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 ZXDCQ2QGD7 858 aaPredicted RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 C11orf42Q8N5U0 333 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 FDCSPQ8NFU4 85 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 MAP1LC3CQ9BXW4 147 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 C11orf94C9JXX5 98 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 F2RL2O00254 374 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 CYB5R3P00387 301 aaPredicted RBP14.07□□□□□ -0.16
USP42-207ENST00000521713 EWSR1Q01844 656 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP42-207ENST00000521713 GPR27Q9NS67 375 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 DSPPQ9NZW4 1301 aa14.07□□□□□ -0.16
USP42-207ENST00000521713 BCL3P20749 454 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 POLR2GP62487 172 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP42-207ENST00000521713 NHLRC3Q5JS37 347 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 SLC35E3Q7Z769 313 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 MUC1P15941 1255 aaPredicted RBP14.06□□□□□ -0.16
USP42-207ENST00000521713 SLC25A47Q6Q0C1 308 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 CLEC2AQ6UVW9 174 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 STARD10Q9Y365 291 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 TDRD6O60522 2096 aaKnown RBP14.06□□□□□ -0.16
USP42-207ENST00000521713 MGAT2Q10469 447 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 HIST3H3Q16695 136 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 PRSS53Q2L4Q9 553 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 Q56UQ5 140 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 OR4B1Q8NGF8 309 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 KCNK17Q96T54 332 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 IFNL4K9M1U5 179 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 OR1L4Q8NGR5 311 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 TBX15Q96SF7 602 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 GP6Q9HCN6 339 aa14.06□□□□□ -0.16
USP42-207ENST00000521713 FOXD3Q9UJU5 478 aaPredicted RBP14.06□□□□□ -0.16
USP42-207ENST00000521713 FAM87AP0C7U9 286 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 CDX1P47902 265 aaPredicted RBP14.05□□□□□ -0.16
USP42-207ENST00000521713 DPF1Q92782 380 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 SLC2A8Q9NY64 477 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 ABCA7Q8IZY2 2146 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 ADAM11O75078 769 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 ETV3LQ6ZN32 361 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 METTL1Q9UBP6 276 aaKnown RBP14.05□□□□□ -0.16
USP42-207ENST00000521713 IL11P20809 199 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 LRRC3CA6NJW4 275 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 PITX3O75364 302 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 MT-ND6P03923 174 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 TGIF2LYQ8IUE0 185 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 TGIF2LXQ8IUE1 241 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 GUCD1Q96NT3 240 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 ELOVL1Q9BW60 279 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 AAMDCQ9H7C9 122 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 TREM2Q9NZC2 230 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 HSPB8Q9UJY1 196 aa14.05□□□□□ -0.16
USP42-207ENST00000521713 HSPB1P04792 205 aaKnown RBP14.04□□□□□ -0.16
USP42-207ENST00000521713 MMP9P14780 707 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 OR1A1Q9P1Q5 309 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 RCC2Q9P258 522 aaKnown RBP14.04□□□□□ -0.16
USP42-207ENST00000521713 CTXND1A0A1B0GTU2 59 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 SOCS1O15524 211 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 OPRK1P41145 380 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
USP42-207ENST00000521713 CD200R1LQ6Q8B3 271 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 APCDD1LQ8NCL9 501 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 PRF1P14222 555 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 TEX30Q5JUR7 227 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 ZNF385CQ66K41 422 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms