RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SLC36A2Q495M3 483 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 SYT6Q5T7P8 510 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-208ENST00000521037 XAF1Q6GPH4 301 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OR2T2Q6IF00 324 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 NANOGP8Q6NSW7 305 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 UNQ6126/PRO20091Q6UXV3 157 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF836Q6ZNA1 936 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 PLEKHG7Q6ZR37 379 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 SLC16A14Q7RTX9 510 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 C6orf120Q7Z4R8 191 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 DPPA2Q7Z7J5 298 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF695Q8IW36 515 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 MKXQ8IYA7 352 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 CLECL1Q8IZS7 167 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 LINC00518Q8N0U6 118 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 LRRC18Q8N456 261 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 KLHL30-AS1Q8NEE0 82 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OR4X2Q8NGF9 303 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OR5K1Q8NHB7 308 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OR5P2Q8WZ92 322 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 PPCDCQ96CD2 204 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 PPP1R36Q96LQ0 422 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 NOL4LQ96MY1 436 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-208ENST00000521037 CCL13Q99616 98 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 APOL4Q9BPW4 351 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 TAPBPLQ9BX59 468 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OR51I1Q9H343 314 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 DUSP21Q9H596 190 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 METTL8Q9H825 291 aaKnown RBP2.85□□□□□ -1.95
VPS13B-208ENST00000521037 SIAEQ9HAT2 523 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 ELL3Q9HB65 397 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-208ENST00000521037 DIABLOQ9NR28 239 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 WARS2Q9UGM6 360 aaKnown RBP2.85□□□□□ -1.95
VPS13B-208ENST00000521037 ENOPH1Q9UHY7 261 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 HHLA2Q9UM44 414 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 DNAJC15Q9Y5T4 150 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 SORL1Q92673 2214 aa2.85□□□□□ -1.95
VPS13B-208ENST00000521037 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 LOC100130705A0A1B0GUX0 176 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 IQCMA0A1B0GVH7 501 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 FAM172BPA6NC97 362 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 METTL21EPA6NDL7 271 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SNTNA6NMZ2 147 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 EVPLLA8MZ36 301 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 LOC110117498-PIK3R3F6TDL0 507 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 CCRL2O00421 344 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GNGT2O14610 69 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 AHSA1O95433 338 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SLC2A10O95528 541 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 TSHBP01222 138 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 KRT6AP02538 564 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 TRAPPC2P0DI81 140 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 TRAPPC2BP0DI82 140 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SLC2A2P11168 524 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 RPL35AP18077 110 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 C4BPBP20851 252 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 CD24P25063 80 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 LAP3P28838 519 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 APLNRP35414 380 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 HPCAL1P37235 193 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OPRL1P41146 370 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ETV6P41212 452 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 MAGEA2P43356 314 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR3A4PP47883 348 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SEC61GP60059 68 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 COPZ1P61923 177 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ERVK-25P63136 954 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 PRKCDQ05655 676 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 FMODQ06828 376 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SPCS2Q15005 226 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SPANXN2Q5MJ10 180 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 FAM27BQ5VT28 67 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GFI1BQ5VTD9 330 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF691Q5VV52 312 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 STUMQ69YW2 141 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 THOC7Q6I9Y2 204 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GLYATQ6IB77 296 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 FAM53AQ6NSI3 398 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 STEAP1BQ6NZ63 245 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 TMEM53Q6P2H8 277 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ERICH5Q6P6B1 374 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF730Q6ZMV8 503 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GPRIN3Q6ZVF9 776 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 AKAP14Q86UN6 197 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 LYPD6Q86Y78 171 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 KRTCAP2Q8N6L1 136 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 BPIFB6Q8NFQ5 453 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR51D1Q8NGF3 324 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR4D10Q8NGI6 311 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR6Q1Q8NGQ2 317 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR9I1Q8NGQ6 314 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR6N1Q8NGY5 312 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR13G1Q8NGZ3 307 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR4Q3Q8NH05 313 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 RHOXF1Q8NHV9 184 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms