RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 FAM27E3Q08E93 113 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 CLEC9AQ6UXN8 241 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 IL34Q6ZMJ4 242 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 STPG2Q8N412 459 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF645Q8N7E2 425 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 ZBTB34Q8NCN2 500 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 BPIFCQ8NFQ6 507 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 MRGPRDQ8TDS7 321 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 COQ2Q96H96 371 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 LURAP1Q96LR2 239 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 OR2V2Q96R30 315 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 MAGT1Q9H0U3 335 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 ELOVL5Q9NYP7 299 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 ZDHHC8Q9ULC8 765 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 CNOT1A5YKK6 2376 aaKnown RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 A0A0G2JNJ9 132 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 SRRM5B3KS81 715 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 SPINT2O43291 252 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 TFF1P04155 84 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 FAM157CP0CG43 387 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 TNFSF4P23510 183 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 RBPJQ06330 500 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 EDDM3AQ14507 147 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 TUSC1Q2TAM9 212 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CXorf66Q5JRM2 361 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 MOGAT3Q86VF5 341 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 DRAM1Q8N682 238 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 TMEM171Q8WVE6 324 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 LSM10Q969L4 123 aaKnown RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 FAM212BQ9NTI7 297 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 Q9UFV3 132 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 METRNQ9UJH8 293 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 SHANK1Q9Y566 2161 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CELSR3Q9NYQ7 3312 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 URB1O60287 2271 aaKnown RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 IGLV3-9A0A075B6K5 115 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 FAM24AA6NFZ4 105 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 C16orf97H3BN30 126 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 PITX3O75364 302 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 NXPH3O95157 252 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 IGLV2-14P01704 120 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 EGR1P18146 543 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 M6PRP20645 277 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CD40P25942 277 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CFHR2P36980 270 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 GLIPR1P48060 266 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 NHLH2Q02577 135 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CATR1Q13166 79 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 PXDC1Q5TGL8 231 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 Q8NA96 180 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 OR52L2PQ8NGH6 319 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 ITLN1Q8WWA0 313 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 GPR146Q96CH1 333 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 BSCL2Q96G97 398 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 SMIM8Q96KF7 97 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 GINS3Q9BRX5 216 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 PARP12Q9H0J9 701 aaKnown RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 OR2D2Q9H210 308 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 ARV1Q9H2C2 271 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 HRH4Q9H3N8 390 aa7.07□□□□□ -1.28
HMGB4-203ENST00000519684 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-203ENST00000519684 APOC3P02656 99 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 SEC11BP0C7V7 166 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 RPL23AP62750 156 aaKnown RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ID3Q02535 119 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 BAXQ07812 192 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF266Q14584 549 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 SSX8Q7RTT4 187 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 WFDC8Q8IUA0 241 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 SNX22Q96L94 193 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 MRPL37Q9BZE1 423 aaKnown RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 C11orf1Q9H5F2 150 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 SEBOXQ9HB31 216 aaPredicted RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 WFDC1Q9HC57 220 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ZFHX2Q9C0A1 2572 aaPredicted RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 IGHV3OR15-7A0A075B7D8 119 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 IGSF23A1L1A6 192 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 B8ZZF3 427 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 MGST3O14880 152 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ATG12O94817 140 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ADH4P08319 380 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 PTAFRP25105 342 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 LPAR6P43657 344 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 TMPRSS3P57727 454 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 BPIFB3P59826 476 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 TNFAIP6P98066 277 aaPredicted RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 PAX5Q02548 391 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 PJVKQ0ZLH3 352 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 MSMO1Q15800 293 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 Q6ZRG5 221 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 TPRX1Q8N7U7 411 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms