RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ATF4P18848 351 aaPredicted RBP19.52■□□□□ 0.71
SLIT3-204ENST00000518140 OR2F1Q13607 317 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 ABCA11PQ4W5N1 156 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 C4orf17Q53FE4 359 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 C11orf87Q6NUJ2 197 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 DUX4L9Q6RFH8 374 aaPredicted RBP19.52■□□□□ 0.71
SLIT3-204ENST00000518140 MOB1BQ7L9L4 216 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 FAM222BQ8WU58 562 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 RTN4IP1Q8WWV3 396 aaPredicted RBP19.52■□□□□ 0.71
SLIT3-204ENST00000518140 PIK3IP1Q96FE7 263 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 TNFSF18Q9UNG2 199 aa19.52■□□□□ 0.71
SLIT3-204ENST00000518140 MPTX1A8MV57 137 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 TRIM77I1YAP6 450 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 IFNA2P01563 188 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 EDDM3AQ14507 147 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 HMGN3Q15651 99 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 SGPP2Q8IWX5 399 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 H1FOOQ8IZA3 346 aaPredicted RBP19.51■□□□□ 0.71
SLIT3-204ENST00000518140 OR1L1Q8NH94 360 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 DIRC2Q96SL1 478 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 PARP12Q9H0J9 701 aaKnown RBP19.51■□□□□ 0.71
SLIT3-204ENST00000518140 DSCAMO60469 2012 aa19.51■□□□□ 0.71
SLIT3-204ENST00000518140 STPG2Q8N412 459 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 MRGPRDQ8TDS7 321 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 PDCD10Q9BUL8 212 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 DNTTIP1Q9H147 329 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 CCL28Q9NRJ3 127 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 HCFC1P51610 2035 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 C13orf42A0A1B0GVH6 325 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 KANTRA0A1W2PQU2 76 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 C12orf77C9JDV5 145 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 TEX46H3BTG2 121 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 ZNF818PQ6ZRF7 136 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 OR13A1Q8NGR1 328 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 ITLN2Q8WWU7 325 aaPredicted RBP19.5■□□□□ 0.71
SLIT3-204ENST00000518140 ERGIC1Q969X5 290 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 SLC5A7Q9GZV3 580 aa19.5■□□□□ 0.71
SLIT3-204ENST00000518140 ZFYVE26Q68DK2 2539 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 ARFGEF3Q5TH69 2177 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 TNFRSF1AP19438 455 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 TESK1Q15569 626 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 NAA60Q9H7X0 242 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 SAP30LQ9HAJ7 183 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 DYNLRB1Q9NP97 96 aa19.49■□□□□ 0.71
SLIT3-204ENST00000518140 HSD17B6O14756 317 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 OR5AC1P0C628 307 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 SNX22Q96L94 193 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 MS4A7Q9GZW8 240 aaPredicted RBP19.48■□□□□ 0.71
SLIT3-204ENST00000518140 SEBOXQ9HB31 216 aaPredicted RBP19.48■□□□□ 0.71
SLIT3-204ENST00000518140 OR2W1Q9Y3N9 320 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 LRBAP50851 2863 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 A0A0B4J2A0 478 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 BCL2L11O43521 198 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 GYPAP02724 150 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 HEXAP06865 529 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 EFNB3Q15768 340 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 ZNF672Q499Z4 452 aaPredicted RBP19.48■□□□□ 0.71
SLIT3-204ENST00000518140 STUMQ69YW2 141 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 SHPKQ9UHJ6 478 aa19.48■□□□□ 0.71
SLIT3-204ENST00000518140 C5orf51A6NDU8 294 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 K7N7A8 449 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 ZNF273Q14593 569 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 ZNF565Q8N9K5 539 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 CCL13Q99616 98 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 VRK1Q99986 396 aaPredicted RBP19.47■□□□□ 0.71
SLIT3-204ENST00000518140 KCNIP1Q9NZI2 227 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 B9A039 149 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 HBZP02008 142 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 HOXB5P09067 269 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 IRF2P14316 349 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 SSTR5P35346 364 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 CEACAM6P40199 344 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 TMEM187Q14656 261 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 SWI5Q1ZZU3 235 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 ACOT7LQ6ZUV0 252 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 RFESDQ8TAC1 157 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 PPP1R1CQ8WVI7 109 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 PHYHIPLQ96FC7 376 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 CNTNAP3BQ96NU0 1288 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 TMEM204Q9BSN7 226 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 CNTNAP3Q9BZ76 1288 aa19.47■□□□□ 0.71
SLIT3-204ENST00000518140 OOEPA6NGQ2 149 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 NPIPB11E5RHQ5 1161 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 HSPA12AO43301 675 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 CLDN14O95500 239 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 LRRC37A5PQ49AS3 106 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 OR52L2PQ8NGH6 319 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 CCL17Q92583 94 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 OR10C1Q96KK4 312 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 EGLN1Q9GZT9 426 aa19.46■□□□□ 0.71
SLIT3-204ENST00000518140 RNF222A6NCQ9 220 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 MPPED1O15442 326 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 CTRB1P17538 263 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 CTRB2Q6GPI1 263 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 MUC15Q8N387 334 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 GLYATL2Q8WU03 294 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 GALNT14Q96FL9 552 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 GAFA1Q96PS6 74 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 TP53RKQ96S44 253 aa19.45■□□□□ 0.7
SLIT3-204ENST00000518140 MS4A5Q9H3V2 200 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms