RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 LGI3Q8N145 548 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZCCHC24Q8N2G6 241 aaKnown RBP4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF808Q8N4W9 903 aaPredicted RBP4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF565Q8N9K5 539 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 BOLLQ8N9W6 283 aaKnown RBP4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNRF1Q8ND25 227 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR13A1Q8NGR1 328 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR1L1Q8NH94 360 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LHFPL5Q8TAF8 219 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IL1F10Q8WWZ1 152 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 AKR1E2Q96JD6 320 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 GAFA1Q96PS6 74 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TP53RKQ96S44 253 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 EGLN1Q9GZT9 426 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TMEM222Q9H0R3 208 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FAM234AQ9H0X4 552 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 MS4A5Q9H3V2 200 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 METTL8Q9H825 291 aaKnown RBP4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LINC00574Q9H8X3 128 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DCAF16Q9NXF7 216 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RDH8Q9NYR8 311 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CISD1Q9NZ45 108 aaKnown RBP4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 COMMD9Q9P000 198 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TNFSF18Q9UNG2 199 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RNF115Q9Y4L5 304 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 U3KQ87 197 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ARHGAP32A7KAX9 2087 aa4.52□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LRBAP50851 2863 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZFYVE26Q68DK2 2539 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 HRNRQ86YZ3 2850 aaPredicted RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FXYD6-FXYD2A0A087WZ82 144 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DUXBA0A1W2PPF3 345 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LRRC30A6NM36 301 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 H0Y980 276 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 L7N2F9 121 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LGALS8O00214 317 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 F2RL2O00254 374 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SIGLEC5O15389 551 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ARPC5O15511 151 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PHF1O43189 567 aaPredicted RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SPINT2O43291 252 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 HSPA12AO43301 675 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR2F2O95006 317 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FSTL3O95633 263 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IFNA21P01568 189 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IRF2P14316 349 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 F2RP25116 425 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 S100GP29377 79 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IL2RGP31785 369 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 S100A11P31949 105 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CD80P33681 288 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 P2RX3P56373 397 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LOXL3P58215 753 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR2F1Q13607 317 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 NDUFA5Q16718 116 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 C17orf58Q2M2W7 97 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ESCO2Q56NI9 601 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PRSS54Q6PEW0 395 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ACOT7LQ6ZUV0 252 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LYZL2Q7Z4W2 148 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SELENOHQ8IZQ5 122 aaKnown RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PRR18Q8N4B5 295 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 KCNRGQ8N5I3 272 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TPRX1Q8N7U7 411 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZBTB34Q8NCN2 500 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF680Q8NEM1 530 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 THAP6Q8TBB0 222 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 MRGPRDQ8TDS7 321 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FAM216AQ8WUB2 273 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ITLN2Q8WWU7 325 aaPredicted RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CORO2AQ92828 525 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IL22RA2Q969J5 263 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ARL11Q969Q4 196 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 C14orf79Q96F83 325 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CNTNAP3BQ96NU0 1288 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 AGMATQ9BSE5 352 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DCTN5Q9BTE1 182 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CNTNAP3Q9BZ76 1288 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 MFFQ9GZY8 342 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PARP12Q9H0J9 701 aaKnown RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DNTTIP1Q9H147 329 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF665Q9H7R5 613 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SAP30LQ9HAJ7 183 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR2S2Q9NQN1 319 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TMEM106BQ9NUM4 274 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR6C3Q9NZP0 311 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 MBD2Q9UBB5 411 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FBXO9Q9UK97 447 aaPredicted RBP4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ITGB1BP2Q9UKP3 347 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TMED3Q9Y3Q3 217 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DOPEY1Q5JWR5 2465 aa4.51□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DCHS2Q6V1P9 2916 aa4.5□□□□□ -1.69
SCARNA20.4-201ENST00000516969 TET2Q6N021 2002 aaPredicted RBP4.5□□□□□ -1.69
SCARNA20.4-201ENST00000516969 USP9XQ93008 2570 aaPredicted RBP4.5□□□□□ -1.69
SCARNA20.4-201ENST00000516969 EPG5Q9HCE0 2579 aa4.5□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PPIAL4EA0A075B759 164 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms