RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TBCEQ15813 527 aaPredicted RBP9.15□□□□□ -0.94
VCAN-212ENST00000515397 C2orf76Q3KRA6 126 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 C6orf183Q5T699 404 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 Q6ZPA2 131 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 ZNF367Q7RTV3 350 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 SPARTQ8N0X7 666 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 GAPTQ8N292 157 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 OR5AU1Q8NGC0 362 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 OR52M1Q8NGK5 317 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 OR6M1Q8NGM8 313 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 CITED2Q99967 270 aaPredicted RBP9.15□□□□□ -0.94
VCAN-212ENST00000515397 WNT10AQ9GZT5 417 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 LIN7BQ9HAP6 207 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 CHMP1AQ9HD42 196 aaPredicted RBP9.15□□□□□ -0.94
VCAN-212ENST00000515397 OR2S2Q9NQN1 319 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 PLEKHJ1Q9NW61 149 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 KCNIP1Q9NZI2 227 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 LINC00527Q9UJ94 153 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 BLOC1S6Q9UL45 172 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 OOSP1A8MZH6 123 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 DENRO43583 198 aaKnown RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 ARL6IP5O75915 188 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 GLAP06280 429 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 PSMB9P28065 219 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 RAB7AP51149 207 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 TMEM50BP56557 158 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 TRAM1Q15629 374 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 C2orf68Q2NKX9 166 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 MORN2Q502X0 79 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 C22orf42Q6IC83 251 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 SLC16A12Q6ZSM3 486 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 SLC25A48Q6ZT89 311 aaKnown RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 CENPVQ7Z7K6 275 aaPredicted RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 ZNF439Q8NDP4 499 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 IL1F10Q8WWZ1 152 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 FAM3DQ96BQ1 224 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 NOL4LQ96MY1 436 aaPredicted RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 TM2D1Q9BX74 207 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 MMP27Q9H306 513 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 MBNL3Q9NUK0 354 aaKnown RBP9.14□□□□□ -0.95
VCAN-212ENST00000515397 AK3Q9UIJ7 227 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 V9GY05 133 aa9.14□□□□□ -0.95
VCAN-212ENST00000515397 NCBP2LA6PVI3 153 aaKnown RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 PSMA1P25786 263 aaKnown RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 OR3A3P47888 321 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 TCTEX1D4Q5JR98 221 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 C11orf88Q6PI97 169 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 ZNF329Q86UD4 541 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 THNSL2Q86YJ6 484 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 OR8H3Q8N146 312 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 WIPF2Q8TF74 440 aaPredicted RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 RTN4IP1Q8WWV3 396 aaPredicted RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 ARHGAP5-AS1Q96IT6 56 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 AKR1E2Q96JD6 320 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 MOB4Q9Y3A3 225 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 RRP15Q9Y3B9 282 aaKnown RBP9.13□□□□□ -0.95
VCAN-212ENST00000515397 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
VCAN-212ENST00000515397 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 ADARB2-AS1A8MUL3 147 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 CA11O75493 328 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 SLC2A2P11168 524 aaPredicted RBP9.12□□□□□ -0.95
VCAN-212ENST00000515397 GABARAPL2P60520 117 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 ZNF816Q0VGE8 651 aaPredicted RBP9.12□□□□□ -0.95
VCAN-212ENST00000515397 MOGAT2Q3SYC2 334 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 PLAC9Q5JTB6 97 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 C16orf82Q7Z2V1 217 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 NR2C2APQ86WQ0 139 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 R3HDM4Q96D70 268 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 RITA1Q96K30 269 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 URM1Q9BTM9 101 aaKnown RBP9.12□□□□□ -0.95
VCAN-212ENST00000515397 PECRQ9BY49 303 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 Q9H521 79 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 RNF167Q9H6Y7 350 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 NDUFB11Q9NX14 153 aa9.12□□□□□ -0.95
VCAN-212ENST00000515397 A0A075B6Q4 140 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 TRDV1A0A1B0GX56 115 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 TCRBV4S1A1TA0A5B7 111 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 FOXI3A8MTJ6 420 aaPredicted RBP9.11□□□□□ -0.95
VCAN-212ENST00000515397 G3V4G9 280 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 NAPSAO96009 420 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 SCTP09683 121 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 IL3RAP26951 378 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 F2RL1P55085 397 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 TRAT1Q6PIZ9 186 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 CD200R1LQ6Q8B3 271 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 OR2W3Q7Z3T1 314 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 TGIF2LXQ8IUE1 241 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 FAM89BQ8N5H3 189 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 DTX3Q8N9I9 347 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 GALMQ96C23 342 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms