RNA–Protein interactions for RNA: ENST00000514665.1

USP53-209, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,233 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-209ENST00000514665 CAMPP49913 170 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 FNDC7Q5VTL7 733 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 TMEM108Q6UXF1 575 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 C1QL2Q7Z5L3 287 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 SHISA5Q8N114 240 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 APCDD1LQ8NCL9 501 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 SLC45A2Q9UMX9 530 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 A0A1W2PRD5 423 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 A0A1W2PRF3 423 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 A0A1W2PRM7 423 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 hADV38S2A0JD32 116 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 OOEPA6NGQ2 149 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 SEC14L6B5MCN3 397 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 FGF2P09038 288 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 ORM2P19652 201 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 RAB7AP51149 207 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 TPPP2P59282 170 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 MOB3AQ96BX8 217 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 FER1L5A0AVI2 2057 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 IGHV1-45A0A0A0MS14 117 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 A0A1B0GU03 582 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 C21orf140B9A014 251 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 GNB2P62879 340 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 ABHD14AQ9BUJ0 271 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 DEDDO75618 318 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 GZMHP20718 246 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 UNC119Q13432 240 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 GAMTQ14353 236 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 TGIF1Q15583 401 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 ZNF826PQ6ZT77 177 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 HES7Q9BYE0 225 aa10.98□□□□□ -0.65
USP53-209ENST00000514665 PSME4Q14997 1843 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 IGHV3OR15-7A0A075B7D8 119 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 SNRPCP09234 159 aaKnown RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 NPBWR2P48146 333 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 FHITP49789 147 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 OR5I1Q13606 314 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 SH2D2AQ9NP31 389 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 TIMM9Q9Y5J7 89 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 NCBP2LA6PVI3 153 aaKnown RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 GAPDHP04406 335 aaKnown RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 MMP9P14780 707 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 G0S2P27469 103 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 FCER1GP30273 86 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 FGF12P61328 243 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 CEACAM21Q3KPI0 293 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 DHRS7BQ6IAN0 325 aaPredicted RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 SLC23A3Q6PIS1 610 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 TRAT1Q6PIZ9 186 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 SPNS3Q6ZMD2 512 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 MRGPRGQ86SM5 289 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 OR4P4Q8NGL7 312 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 MRPL30Q8TCC3 161 aaKnown RBP10.97□□□□□ -0.65
USP53-209ENST00000514665 PI4KAP42356 2102 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.97□□□□□ -0.652e-16■■□□□ 12
USP53-209ENST00000514665 PRR32B1ATL7 298 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 IQCJQ1A5X6 159 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 RPEQ96AT9 228 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 ABHD14BQ96IU4 210 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 PARD6AQ9NPB6 346 aa10.97□□□□□ -0.65
USP53-209ENST00000514665 LOC102723971A0A1B0GUV8 181 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 KLK2P20151 261 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
USP53-209ENST00000514665 OR10A7Q8NGE5 316 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 OR5D13Q8NGL4 314 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 OR1L4Q8NGR5 311 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 VAMP8Q9BV40 100 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 TMEM222Q9H0R3 208 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 ZNF665Q9H7R5 613 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 MYOZ1Q9NP98 299 aaPredicted RBP10.96□□□□□ -0.65
USP53-209ENST00000514665 MSGN1A6NI15 193 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 FAM157AC9JC47 383 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 CA11O75493 328 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 CD74P04233 296 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 HKR1P10072 659 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 FGF5P12034 268 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 PSG5Q15238 335 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 OR52M1Q8NGK5 317 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 OR10G8Q8NGN5 311 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 OR2T6Q8NHC8 308 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.65
USP53-209ENST00000514665 RALGAPA2Q2PPJ7 1873 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 GDF9O60383 454 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 FBP1P09467 338 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 AMTP48728 403 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 LDLRAD3Q86YD5 345 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 DNASE2BQ8WZ79 361 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 FUT9Q9Y231 359 aa10.96□□□□□ -0.66
USP53-209ENST00000514665 FAM90A27PA6NNH2 459 aa10.95□□□□□ -0.66
USP53-209ENST00000514665 LY86O95711 162 aa10.95□□□□□ -0.66
USP53-209ENST00000514665 TIPARPQ7Z3E1 657 aaKnown RBP10.95□□□□□ -0.66
USP53-209ENST00000514665 OR52L2PQ8NGH6 319 aa10.95□□□□□ -0.66
USP53-209ENST00000514665 SRXN1Q9BYN0 137 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms