RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 DAZAP1Q96EP5 407 aaKnown RBP11.43□□□□□ -0.58
TCOF1-213ENST00000514442 RNF126Q9BV68 326 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 SRD5A3Q9H8P0 318 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 KCNIP2Q9NS61 270 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 NGFRP08138 427 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 HLA-GP17693 338 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 GNB2P62879 340 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 ADIPOR1Q96A54 375 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 WFIKKN1Q96NZ8 548 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 OR2H1Q9GZK4 316 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 ERRFI1Q9UJM3 462 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-213ENST00000514442 LOC102724200A0A096LPH7 203 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-213ENST00000514442 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 CEACAM6P40199 344 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 MANBALQ9NQG1 85 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 CLCF1Q9UBD9 225 aa11.43□□□□□ -0.58
TCOF1-213ENST00000514442 NKX2-8O15522 239 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 RAMP1O60894 148 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 FCGR3AP08637 254 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 ZNF154Q13106 437 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 FAM162BQ5T6X4 162 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 FHL5Q5TD97 284 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 TSPO2Q5TGU0 170 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 OR10P1Q8NGE3 313 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 CCL17Q92583 94 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 GINS3Q9BRX5 216 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 GNB4Q9HAV0 340 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 ZNF205O95201 554 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 ZNF708P17019 499 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 TMEM11P17152 192 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 RNF133Q8WVZ7 376 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 DMRTA2Q96SC8 542 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 HS3ST3B1Q9Y662 390 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 DLEU1O43261 78 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 PDCD6O75340 191 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 FGF5P12034 268 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 CD99P14209 185 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 TNFRSF1AP19438 455 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 TMEM38BQ9NVV0 291 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 HSBP1O75506 76 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 ELOBQ15370 118 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 BTNL3Q6UXE8 466 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 Q8IYB0 196 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 EDARADDQ8WWZ3 215 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
TCOF1-213ENST00000514442 M0R1X1 148 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 THY1P04216 161 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 LINC00614P0C842 121 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 RPS4XP62701 263 aaKnown RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 BHLHA15Q7RTS1 189 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 ABCA7Q8IZY2 2146 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 GYPAP02724 150 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 ERGIC1Q969X5 290 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 ADGRG7Q96K78 797 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 HSPB9Q9BQS6 159 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 UQCR10Q9UDW1 63 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 GREB1Q4ZG55 1949 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 GBF1Q92538 1859 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 KLF3P57682 345 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 ADAT3Q96EY9 351 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 HES7Q9BYE0 225 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 SVILO95425 2214 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 CDS2O95674 445 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 TBX6O95947 436 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 SOD3P08294 240 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 OR5G3P0C626 314 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 RPS4Y1P22090 263 aaKnown RBP11.41□□□□□ -0.58
TCOF1-213ENST00000514442 C1orf100Q5SVJ3 147 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 SLC35E1Q96K37 410 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 RLFQ13129 1914 aa11.41□□□□□ -0.58
TCOF1-213ENST00000514442 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 NDUFB3O43676 98 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 SELLP14151 372 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 HOXA6P31267 233 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 HLA-DRB5Q30154 266 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 ZNF506Q5JVG8 444 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 AMELYQ99218 206 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CISD1Q9NZ45 108 aaKnown RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 PSG11Q9UQ72 335 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CT45A6P0DMU7 189 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CT45A5P0DMU8 189 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CT45A7P0DMV0 189 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 MGAT2Q10469 447 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CT45A1Q5HYN5 189 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms