RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 C8orf44Q96CB5 159 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PHYHIPLQ96FC7 376 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 CENPNQ96H22 339 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SIGLEC12Q96PQ1 595 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF649Q9BS31 505 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ADAT1Q9BUB4 502 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PBDC1Q9BVG4 233 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 RSPO3Q9BXY4 272 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC25A31Q9H0C2 315 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 RBKSQ9H477 322 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 IKZF5Q9H5V7 419 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZDHHC11Q9H8X9 412 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ASF1BQ9NVP2 202 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MRPL16Q9NX20 251 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MED29Q9NX70 200 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 GNG12Q9UBI6 72 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF107Q9UII5 783 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MMP17Q9ULZ9 603 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SNX10Q9Y5X0 201 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 V9GYY9 64 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MYO5CQ9NQX4 1742 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZFYVE16Q7Z3T8 1539 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MYH2Q9UKX2 1941 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 N4BP2Q86UW6 1770 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 IQGAP1P46940 1657 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ADGBQ8N7X0 1667 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TRAV38-1A0A0B4J264 116 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 LOC100130705A0A1B0GUX0 176 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TNFSF11O14788 317 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 DEGS1O15121 323 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ERI3O43414 337 aaKnown RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TPST2O60704 377 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 SCRG1O75711 98 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TNFSF13O75888 250 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 OR2J3O76001 311 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 CA1P00915 261 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ALDOBP05062 364 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 CTSLP07711 333 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 RHOCP08134 193 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 CD14P08571 375 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 HIST1H1TP22492 207 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 FASP25445 335 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 IMPA1P29218 277 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TGFBR1P36897 503 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 MDH2P40926 338 aaKnown RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 DAP3P51398 398 aaKnown RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TCTAP57738 103 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 S100A10P60903 97 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 RHOAP61586 193 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 RHOBP62745 196 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 GGTA1PQ4G0N0 100 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 COA6Q5JTJ3 125 aaKnown RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 FAM162BQ5T6X4 162 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 CPTPQ5TA50 214 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 IL34Q6ZMJ4 242 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 HIST2H3AQ71DI3 136 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 NEGR1Q7Z3B1 354 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ACOT1Q86TX2 421 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 MARCH9Q86YJ5 346 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 LRRC25Q8N386 305 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TCTEX1D1Q8N7M0 179 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 FER1L6-AS1Q8NA97 138 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 INO80EQ8NBZ0 244 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 PLPP5Q8NEB5 264 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 SDR9C7Q8NEX9 313 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TSTD1Q8NFU3 115 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 OR10G4Q8NGN3 311 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 OR6N2Q8NGY6 317 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 OR5W2Q8NH69 310 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-207ENST00000513819 Q8WTZ3 238 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 RAB8BQ92930 207 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 LYSMD1Q96S90 227 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 PYGO2Q9BRQ0 406 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 GINS3Q9BRX5 216 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 NDFIP1Q9BT67 221 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 C20orf27Q9GZN8 174 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 LPAR5Q9H1C0 372 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 OR51J1Q9H342 316 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TAF9BQ9HBM6 251 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 PIPOXQ9P0Z9 390 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 DPM3Q9P2X0 92 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 B4GALT7Q9UBV7 327 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 SLC23A2Q9UGH3 650 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 VAX2Q9UIW0 290 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF222Q9UK12 451 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TBX21Q9UL17 535 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TRAPPC2LQ9UL33 140 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 MYH1P12882 1939 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 AKAP11Q9UKA4 1901 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 KIF13AQ9H1H9 1805 aa3.28□□□□□ -1.88
NIPBL-207ENST00000513819 TP53BP1Q12888 1972 aaPredicted RBP3.27□□□□□ -1.89
NIPBL-207ENST00000513819 PIK3C2BO00750 1634 aa3.27□□□□□ -1.89
NIPBL-207ENST00000513819 TIAM1Q13009 1591 aa3.27□□□□□ -1.89
NIPBL-207ENST00000513819 A0A087WUU8 490 aa3.27□□□□□ -1.89
NIPBL-207ENST00000513819 A0A0D9SG52 128 aa3.27□□□□□ -1.89
NIPBL-207ENST00000513819 CENPVL3A0A0U1RRI6 287 aa3.27□□□□□ -1.89
NIPBL-207ENST00000513819 KIR2DS1A0A191URI9 304 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms