RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 UNKLQ9H9P5 680 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 Q9N2K0 584 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 TNFRSF19Q9NS68 423 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 OR1A1Q9P1Q5 309 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 NAV3Q8IVL0 2385 aa7.96□□□□□ -1.13
TOPBP1-209ENST00000513818 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 SERPINE3A8MV23 424 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 RGS5O15539 181 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 SPINT2O43291 252 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 TMEM127O75204 238 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 SCGNO76038 276 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 APOA1P02647 267 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 SCTP09683 121 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 PPP1CCP36873 323 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 TALDO1P37837 337 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 UBE2E1P51965 193 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 LOXL3P58215 753 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 FAM189A2Q15884 450 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 HACD4Q5VWC8 232 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF626Q68DY1 528 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 MZT2AQ6P582 158 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 C1orf122Q6ZSJ8 110 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 MOB1BQ7L9L4 216 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 SNX29P2Q8IUI4 249 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 DYNAPQ8N1N2 210 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 ABHD12Q8N2K0 398 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 TEX29Q8N6K0 151 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 GVQW1Q8N7I0 195 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 OR4P4Q8NGL7 312 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 MCFD2Q8NI22 146 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 S100A16Q96FQ6 103 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 AUNIPQ9H7T9 357 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 HEXA-AS1Q9H8Q6 139 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 DIABLOQ9NR28 239 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 GFOD1Q9NXC2 390 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 KCNIP1Q9NZI2 227 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 MRPS7Q9Y2R9 242 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-209ENST00000513818 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 IGKV1-6A0A0C4DH72 117 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 F2RL2O00254 374 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 XRCC3O43542 346 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 ORC5O43913 435 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 GSTT2P0CG29 244 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 GSTT2BP0CG30 244 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 GZMHP20718 246 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 HERPUD1Q15011 391 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 CNIH2Q6PI25 160 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 TRAT1Q6PIZ9 186 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 OR11H6Q8NGC7 330 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 RBMXL1Q96E39 390 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 ST6GALNAC5Q9BVH7 336 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 LINC00574Q9H8X3 128 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 ESM1Q9NQ30 184 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 OR2S2Q9NQN1 319 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 SLC23A1Q9UHI7 598 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 PSG11Q9UQ72 335 aa7.95□□□□□ -1.14
TOPBP1-209ENST00000513818 A0A087X0M5 115 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 A0A0A6YYH2 397 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 A0A1B0GX30 115 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 ANKRD34BA5PLL1 514 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 A6NJ64 397 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 TRDCB7Z8K6 153 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF701M0R085 212 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 TOR1AO14656 332 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 BET1O15155 118 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 FABP7O15540 132 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 VENTXO95231 258 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 IGLV1-47P01700 117 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 IGHV4-59P01825 116 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 HLA-DQB1P01920 261 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 CD34P28906 385 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 MNDAP41218 407 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 REG1BP48304 166 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 LGALS4P56470 323 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 DIAPH2-AS1Q14236 149 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 SSX2Q16385 188 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 PNLIPRP3Q17RR3 467 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 HLA-DRB5Q30154 266 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 IGSF11Q5DX21 431 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 OR52W1Q6IF63 320 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 C9orf139Q6ZV77 190 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF439Q8NDP4 499 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 OR9G1Q8NH87 305 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 RIMS4Q9H426 269 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 FAM96BQ9Y3D0 163 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 HILPDAQ9Y5L2 63 aa7.94□□□□□ -1.14
TOPBP1-209ENST00000513818 DNAJC9-AS1A6NH13 148 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 J3QR06 171 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 J3QRK9 145 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 HOXA3O43365 443 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 MELTFP08582 738 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 FBP1P09467 338 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms