RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KIF25Q9UIL4 384 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ERRFI1Q9UJM3 462 aaPredicted RBP7□□□□□ -1.29
RNF4-220ENST00000513578 ARFGEF3Q5TH69 2177 aa7□□□□□ -1.29
RNF4-220ENST00000513578 TEX15Q9BXT5 2789 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CACNA1DQ01668 2161 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 IGHV3-64DA0A0J9YX35 117 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 RNF222A6NCQ9 220 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 LRRC30A6NM36 301 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 E7EQL1 145 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 C15orf65H3BRN8 121 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 ITGB1BP1O14713 200 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 PHF1O43189 567 aaPredicted RBP6.99□□□□□ -1.29
RNF4-220ENST00000513578 RP2O75695 350 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 FSTL3O95633 263 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 IGLV2-14P01704 120 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 HBZP02008 142 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 HOXB5P09067 269 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 CGB3P0DN86 165 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 CGB7P0DN87 165 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SLC25A6P12236 298 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 IRF2P14316 349 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 AGAP20933 346 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 F2RP25116 425 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SSTR2P30874 369 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 TMEM30BQ3MIR4 351 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 ZNF788Q6ZQV5 615 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 C5orf24Q7Z6I8 188 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SELENOHQ8IZQ5 122 aaKnown RBP6.99□□□□□ -1.29
RNF4-220ENST00000513578 ZNF808Q8N4W9 903 aaPredicted RBP6.99□□□□□ -1.29
RNF4-220ENST00000513578 TCTEX1D1Q8N7M0 179 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 OR8H1Q8NGG4 311 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SECTM1Q8WVN6 248 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 PLPPR2Q96GM1 343 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 BBC3Q96PG8 261 aaPredicted RBP6.99□□□□□ -1.29
RNF4-220ENST00000513578 AQP10Q96PS8 301 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 TP53RKQ96S44 253 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SPIN2AQ99865 258 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 SPIN2BQ9BPZ2 258 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 ZNF665Q9H7R5 613 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 KCNJ16Q9NPI9 418 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 OR1A1Q9P1Q5 309 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 MBD2Q9UBB5 411 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 GAB2Q9UQC2 676 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 MAB21L2Q9Y586 359 aa6.99□□□□□ -1.29
RNF4-220ENST00000513578 ICE1Q9Y2F5 2266 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 CFAP46Q8IYW2 2715 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 ODAMA1E959 279 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 RNF212BA8MTL3 300 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 MPTX1A8MV57 137 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 H0YIZ8 118 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 LGALS8O00214 317 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 F2RL2O00254 374 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 HSPA12AO43301 675 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 BCL2L11O43521 198 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 LOXP28300 417 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 IL2RGP31785 369 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 CEACAM6P40199 344 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 GABRA2P47869 451 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 GLIPR1P48060 266 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 P2RX3P56373 397 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 TLE1Q04724 770 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 TFF3Q07654 80 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 EIF4EBP1Q13541 118 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 LY6DQ14210 128 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 SWI5Q1ZZU3 235 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 IAH1Q2TAA2 248 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 MST1LQ2TV78 715 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 SP6Q3SY56 376 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 CLLU1Q5K131 121 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 ADAM5Q6NVV9 412 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 C1orf87Q8N0U7 546 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 ZNF645Q8N7E2 425 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 INO80EQ8NBZ0 244 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 OR13A1Q8NGR1 328 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 LHFPL5Q8TAF8 219 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 CORO2AQ92828 525 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 LSM10Q969L4 123 aaKnown RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 C14orf79Q96F83 325 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 ARL6Q9H0F7 186 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 LINC00574Q9H8X3 128 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 OR6C3Q9NZP0 311 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 UBQLN2Q9UHD9 624 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 JPT1Q9UK76 154 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 PPP1R3CQ9UQK1 317 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 UBE2J1Q9Y385 318 aaPredicted RBP6.98□□□□□ -1.29
RNF4-220ENST00000513578 RNF115Q9Y4L5 304 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 KALRNO60229 2985 aa6.98□□□□□ -1.29
RNF4-220ENST00000513578 TRAV39A0A0B4J263 110 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 TRAV38-1A0A0B4J264 116 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 KANTRA0A1W2PQU2 76 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 HSD17B6O14756 317 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 TAAR5O14804 337 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 TNFRSF13BO14836 293 aaPredicted RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 SIGLEC5O15389 551 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 SPINT2O43291 252 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 YPEL1O60688 119 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 TSC22D2O75157 780 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms