RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 OR4K13Q8NH42 304 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 OR10A6Q8NH74 314 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 OR56B4Q8NH76 319 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TRMT10AQ8TBZ6 339 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 RNF133Q8WVZ7 376 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 RGP1Q92546 391 aaPredicted RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ARPC1AQ92747 370 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TOMM40LQ969M1 308 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 S1PR3Q99500 378 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 CGREF1Q99674 301 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 BARHL1Q9BZE3 327 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 PKIBQ9C010 78 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 NCOR1P1Q9H4R4 102 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GNB4Q9HAV0 340 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 RPRD1BQ9NQG5 326 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 PLSCR3Q9NRY6 295 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC2A8Q9NY64 477 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF319Q9P2F9 582 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 COPS3Q9UNS2 423 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TP53TG1Q9Y2A0 90 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A0U1RQV5 110 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A1W2PPI3 338 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 DHRS12A0PJE2 317 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF729A6NN14 1252 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CXCR6O00574 342 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 DLGAP1O14490 977 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 FFAR1O14842 300 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 MOSP00540 346 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 NPPAP01160 153 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 IGKV1D-33P01593 117 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 IGKV1-33P01594 117 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 IFNA4P05014 189 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 LGALS1P09382 135 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CGB3P0DN86 165 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CGB7P0DN87 165 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZP3P21754 424 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CD1BP29016 333 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 BMI1P35226 326 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 OMPP47874 163 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 NPBWR2P48146 333 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF121P58317 390 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 MTPNP58546 118 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF45Q02386 682 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF816Q0VGE8 651 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CYLC2Q14093 348 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 DGCR6Q14129 220 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF146Q15072 292 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 GRK1Q15835 563 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CYBRD1Q53TN4 286 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF684Q5T5D7 378 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 PYHIN1Q6K0P9 492 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 TBPL2Q6SJ96 375 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 EPGNQ6UW88 154 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 TRAPPC6BQ86SZ2 158 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 CYP4Z1Q86W10 505 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ANGPTL5Q86XS5 388 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 Q8IYB0 196 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 RNF148Q8N7C7 305 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 GVQW1Q8N7I0 195 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 TCTEX1D1Q8N7M0 179 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 PROKR2Q8NFJ6 384 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 PHLDA1Q8WV24 401 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 SECTM1Q8WVN6 248 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ANP32BQ92688 251 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF488Q96MN9 340 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 OR52B2Q96RD2 323 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 OVOL2Q9BRP0 275 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ABHD6Q9BV23 337 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 TMEM109Q9BVC6 243 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 FGF23Q9GZV9 251 aaPredicted RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 SLA2Q9H6Q3 261 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 LINC00574Q9H8X3 128 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF286AQ9HBT8 521 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC25A19Q9HC21 320 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 RETNQ9HD89 108 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 RCC2Q9P258 522 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC7A11Q9UPY5 501 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 GAB2Q9UQC2 676 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 COMMD3-BMI1R4GMX3 469 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A087WW49 117 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 TRAV41A0A0B4J266 112 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 IGHV1-3A0A0C4DH29 117 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 A0A0J9YWU9 116 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 KBTBD11-OT1A0A1B0GTJ5 212 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 PQLC2LA1A4F0 135 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 TVP23AA6NH52 213 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 DHRS7CA6NNS2 312 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 OR11H12B2RN74 326 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 ANGPT2O15123 496 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 MAGEB3O15480 346 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 TXNL1O43396 289 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 AIREO43918 545 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 NRASP01111 189 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 CSN2P05814 226 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 H2BFMP0C1H6 154 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 VPREB1P12018 145 aa2.71□□□□□ -1.98
PDLIM5-218ENST00000513341 H2AFXP16104 143 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms