RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 FAM210BQ96KR6 192 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ROPN1Q9HAT0 212 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ADGRL4Q9HBW9 690 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 FAM118AQ9NWS6 357 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 DEGS1O15121 323 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 ANGPT2O15123 496 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 GATBO75879 557 aaKnown RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 KDM4BO94953 1096 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 APOL3O95236 402 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 MIFP14174 115 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 GZMHP20718 246 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CDK5R1Q15078 307 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF829Q3KNS6 432 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 PAN3Q58A45 887 aaKnown RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CT45A1Q5HYN5 189 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 DEGS2Q6QHC5 323 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 FAM131AQ6UXB0 335 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 TCEANCQ8N8B7 351 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CT45A3Q8NHU0 189 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 GRPEL2Q8TAA5 225 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 PLPPR1Q8TBJ4 325 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 ARL11Q969Q4 196 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 YTHDF1Q9BYJ9 559 aaKnown RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CHST5Q9GZS9 411 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 PGPEP1Q9NXJ5 209 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF230Q9UIE0 474 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 CDH10Q9Y6N8 788 aa6.68□□□□□ -1.34
CLCN3-208ENST00000512813 IGKV1-12A0A0C4DH73 117 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 H0YJX3 145 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 SELENOFO60613 162 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF682O95780 498 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-208ENST00000512813 IGKV1D-12P01611 117 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 LGALS7P47929 136 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 KCNJ3P48549 501 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 RBP2P50120 134 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF691Q5VV52 312 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 STEAP3Q658P3 488 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 RPL13AP3Q6NVV1 102 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 EPGNQ6UW88 154 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM179BQ7Z7N9 219 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 OR8J3Q8NGG0 315 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 GHSRQ92847 366 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 HSH2DQ96JZ2 352 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM68Q96MH6 324 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 CLCC1Q96S66 551 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 RHOFQ9HBH0 211 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 TAS2R1Q9NYW7 299 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
CLCN3-208ENST00000512813 TRAV24A0A0B4J272 114 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 FAM220BPB1ANY3 271 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 TSPAN4O14817 238 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 SLC22A1O15245 554 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
CLCN3-208ENST00000512813 TUSC2O75896 110 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF20P17024 532 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 ALOX5APP20292 161 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 CCL1P22362 96 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 ASIPP42127 132 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 TSPAN31Q12999 210 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 PDZK1IP1Q13113 114 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 FXYD3Q14802 87 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 FAM209BQ5JX69 171 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 GPHB5Q86YW7 130 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 SETD9Q8NE22 299 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 OR8D4Q8NGM9 314 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 CNN2Q99439 309 aaKnown RBP6.66□□□□□ -1.34
CLCN3-208ENST00000512813 SH3GL1Q99961 368 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 MOB1AQ9H8S9 216 aa6.66□□□□□ -1.34
CLCN3-208ENST00000512813 INTS9Q9NV88 658 aaKnown RBP6.66□□□□□ -1.34
CLCN3-208ENST00000512813 METTL1Q9UBP6 276 aaKnown RBP6.66□□□□□ -1.34
CLCN3-208ENST00000512813 FAM223BA6NKX1 122 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ORC5O43913 435 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 SRSF10O75494 262 aaKnown RBP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 OR2C1O95371 312 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 HLA-AP01891 365 aaKnown RBP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 C8orf88P0DMB2 117 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF3P17036 446 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 SF3A3Q12874 501 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 WHAMMP3Q1A5X7 153 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 OR4A47Q6IF82 309 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 FKBP9P1Q75LS8 142 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 FAM223AQ8IWN6 122 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ODF3L1Q8IXM7 274 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ELMOD2Q8IZ81 293 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ADAD2Q8NCV1 583 aaKnown RBP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 ZNRF2Q8NHG8 242 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 MARC2Q969Z3 335 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 MROQ9BYG7 248 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 C5orf66Q9H5L9 145 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 MED20Q9H944 212 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 AKIP1Q9NQ31 210 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 COA4Q9NYJ1 87 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms