RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GNG10P50151 68 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 TAS2R43P59537 309 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 RUNX1Q01196 453 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 CFHR3Q02985 330 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 ATAD3CQ5T2N8 411 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 FAM53AQ6NSI3 398 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-216ENST00000512683 TRAT1Q6PIZ9 186 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 ZNF497Q6ZNH5 498 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 SLC25A48Q6ZT89 311 aaKnown RBP9.85□□□□□ -0.83
VEGFA-216ENST00000512683 ZNF554Q86TJ5 538 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 CDH26Q8IXH8 852 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 BPIFB6Q8NFQ5 453 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 C4orf3Q8WVX3 66 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 MUL1Q969V5 352 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 CYYR1Q96J86 154 aa9.85□□□□□ -0.83
VEGFA-216ENST00000512683 RCC2Q9P258 522 aaKnown RBP9.85□□□□□ -0.83
VEGFA-216ENST00000512683 NKX1-2Q9UD57 310 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-216ENST00000512683 MRPS28Q9Y2Q9 187 aaKnown RBP9.85□□□□□ -0.83
VEGFA-216ENST00000512683 A0A1W2PPE3 182 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 SDCBPO00560 298 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-216ENST00000512683 MAS1P04201 325 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 PSMB8P28062 276 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 FHL3Q13643 280 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 INSL4Q14641 139 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 C6orf183Q5T699 404 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 GLIPR1L1Q6UWM5 242 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 JAGN1Q8N5M9 183 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 FAM71E2Q8N5Q1 922 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 UBALD1Q8TB05 177 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 CCDC107Q8WV48 283 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 UBE2E2Q96LR5 201 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 SCOCQ9UIL1 159 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 RYR3Q15413 4870 aa9.84□□□□□ -0.83
VEGFA-216ENST00000512683 COL7A1Q02388 2944 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 FAM90A10PA6NDY2 464 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 FAM90A7PA6NKC0 464 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 FAM90A23PA8MXZ1 464 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 SEC14L6B5MCN3 397 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 MCRIP1C9JLW8 97 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 MYL12BO14950 172 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 CDK1P06493 297 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 OR8U8P0C7N1 319 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 VHLP40337 213 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 ECI1P42126 302 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 RAB25P57735 213 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 RNLSQ5VYX0 342 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 SIGIRRQ6IA17 410 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 TMEM65Q6PI78 240 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 ZNF429Q86V71 674 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 GAPTQ8N292 157 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 MYOZ3Q8TDC0 251 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 NRG4Q8WWG1 115 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 BANF2Q9H503 90 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 LRRC42Q9Y546 428 aa9.83□□□□□ -0.84
VEGFA-216ENST00000512683 IGHV3-72A0A0B4J1Y9 119 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 AIPO00170 330 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 LANCL1O43813 399 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 MGMTP16455 207 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 REG1BP48304 166 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 LY6G6FQ5SQ64 297 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 C6orf141Q5SZD1 244 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 FAM27D1Q5T7N8 215 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 AWAT2Q6E213 333 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 RAB12Q6IQ22 244 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 NEK7Q8TDX7 302 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 Q96M66 194 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 KCTD7Q96MP8 289 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 ERGIC3Q9Y282 383 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 ZNF256Q9Y2P7 627 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-216ENST00000512683 LSM2Q9Y333 95 aaKnown RBP9.82□□□□□ -0.84
VEGFA-216ENST00000512683 SMAD5-AS1Q9Y6J3 95 aa9.82□□□□□ -0.84
VEGFA-216ENST00000512683 IGHV3-43A0A0B4J1X8 118 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 PTGES3LE9PB15 166 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 SC5DO75845 299 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 IGHV3-43DP0DP04 118 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 RCC1P18754 421 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-216ENST00000512683 PPIFP30405 207 aaKnown RBP9.81□□□□□ -0.84
VEGFA-216ENST00000512683 ZNF260Q3ZCT1 412 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 CT45A1Q5HYN5 189 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 NKAPLQ5M9Q1 402 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 SYT6Q5T7P8 510 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-216ENST00000512683 NKAIN3Q8N8D7 197 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 ZNF439Q8NDP4 499 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 OR11H1Q8NG94 326 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 OR1N2Q8NGR9 330 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 OR4K15Q8NH41 348 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 CT45A3Q8NHU0 189 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 DUX3Q96PT4 197 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 UQCC2Q9BRT2 126 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 GNG12Q9UBI6 72 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 ZNF107Q9UII5 783 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-216ENST00000512683 TRAPPC2LQ9UL33 140 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 PEX16Q9Y5Y5 336 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 STAB2Q8WWQ8 2551 aa9.81□□□□□ -0.84
VEGFA-216ENST00000512683 I3L521 148 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms