RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
PDLIM5-217ENST00000512274 ARHGAP32A7KAX9 2087 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 IGKV1D-8A0A087WSZ0 117 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 UBE2QL1A1L167 161 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 LRRC30A6NM36 301 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 M0QZ24 198 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 FABP7O15540 132 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 PMP2P02689 132 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 CTSDP07339 412 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 GLP1RP43220 463 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ARPC4P59998 168 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 LMO4P61968 165 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 HLA-DRB3P79483 266 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 HMGN3Q15651 99 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 MSMO1Q15800 293 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 KCNJ8Q15842 424 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 DCAF12L2Q5VW00 463 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 C17orf107Q6ZR85 190 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ZNF826PQ6ZT77 177 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 C1orf87Q8N0U7 546 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 KIR3DL3Q8N743 410 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ANGPTL6Q8NI99 470 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ZNF431Q8TF32 576 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 MOB3AQ96BX8 217 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 SNX22Q96L94 193 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 HDHD3Q9BSH5 251 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 WDR13Q9H1Z4 485 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 MED28Q9H204 178 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ING3Q9NXR8 418 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 ZNF230Q9UIE0 474 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 FLVCR2Q9UPI3 526 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 VSIG4Q9Y279 399 aa8.65□□□□□ -1.02
PDLIM5-217ENST00000512274 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 MEIKINA0A087WXM9 373 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 TRBV6-7A0A0A0MS04 114 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 TMEM30CPA0ZSE6 113 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 SPRY3O43610 288 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 CCNKO75909 580 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 SNAPC5O75971 98 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 OR2A4O95047 310 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 TK1P04183 234 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 OR4E1P0C645 316 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 VSIG10L2P0DP72 767 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 PSG2P11465 335 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 ZBTB25P24278 435 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 PRDX2P32119 198 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 OR3A1P47881 315 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 RND3P61587 244 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 TSPAN5P62079 268 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 TMEM30BQ3MIR4 351 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 C6orf183Q5T699 404 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 STUMQ69YW2 141 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 MOGAT3Q86VF5 341 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 FAM185AQ8N0U4 392 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 BCL6BQ8N143 479 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 OR5D13Q8NGL4 314 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 MITD1Q8WV92 249 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 DYRK2Q92630 601 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 OR2A7Q96R45 310 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 LINC00574Q9H8X3 128 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 PPP1R3CQ9UQK1 317 aa8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-217ENST00000512274 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 hCG_1807616A0A1W2PRN6 198 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 OR5H14A6NHG9 310 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 RFPL4AA6NLU0 287 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 RFPL4AL1F8VTS6 287 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 K7N7A8 449 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 LGALS8O00214 317 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 MGST3O14880 152 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 TIMM23O14925 209 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 NDUFA2O43678 99 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 PSPNO60542 156 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 DUS4LO95620 317 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 HPXP02790 462 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 HNRNPCP07910 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 ANXA7P20073 488 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 DUSP1P28562 367 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 DHRS2Q13268 280 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 SCGB2B2Q4G0G5 96 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 SPRNQ5BIV9 151 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 LY6G6FQ5SQ64 297 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 C11orf88Q6PI97 169 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF788Q6ZQV5 615 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 SLC38A6Q8IZM9 456 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 CD177Q8N6Q3 437 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 RDH5Q92781 318 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 GALNT14Q96FL9 552 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 CYYR1Q96J86 154 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms