RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BLCAPP62952 87 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DYNLT1P63172 113 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TNFRSF9Q07011 255 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 SCRN3Q0VDG4 424 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 USF2Q15853 346 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DGUOKQ16854 277 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF404Q494X3 552 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 C22orf42Q6IC83 251 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 C10orf99Q6UWK7 81 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TMPPEQ6ZT21 453 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 Q6ZVH6 145 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 AAED1Q7RTV5 226 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 SYCE1Q8N0S2 351 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 FAM58AQ8N1B3 248 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 C6orf223Q8N319 242 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 FTMTQ8N4E7 242 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 NKAPP1Q8N9T2 125 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 OR51S1Q8NGJ8 323 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 OR4A4PQ8NGN8 299 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 NELFBQ8WX92 580 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 UFD1Q92890 307 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 AURKBQ96GD4 344 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 QKIQ96PU8 341 aaKnown RBP eCLIP2.3□□□□□ -2.043e-11■■■■□ 21.5
TOPBP1-208ENST00000511439 ZNF382Q96SR6 550 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RNF2Q99496 336 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TMEM246Q9BRR3 403 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TMED9Q9BVK6 235 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 FRMD8P1Q9BZ68 369 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 POLR2J2Q9GZM3 115 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 MFFQ9GZY8 342 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 POLR2J3Q9H1A7 115 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 GAL3ST2Q9H3Q3 398 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RBKSQ9H477 322 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 CCNB1IP1Q9NPC3 277 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 MTCH1Q9NZJ7 389 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 CHMP5Q9NZZ3 219 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 FBXL3Q9UKT7 428 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 V9GY05 133 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 IGHV3OR16-13A0A075B7E8 117 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 TCRBV9S1A1TA0A576 114 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 OR5B21A6NL26 309 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 C12orf71A8MTZ7 269 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SERPINE3A8MV23 424 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SIRPB1O00241 398 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 AIM2O14862 343 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 TGOLN2O43493 480 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 UTS2O95399 124 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 FSTL3O95633 263 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 GAPDHP04406 335 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 IFNA4P05014 189 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 CD79AP11912 226 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 COX7A1P24310 79 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 KDELR1P24390 212 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 HTR1FP30939 366 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 UBE2E1P51965 193 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 ERVK-25P63136 954 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 DAZ2Q13117 558 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 KLRD1Q13241 179 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PMS2P3Q13401 168 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 OR5I1Q13606 314 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 OXA1LQ15070 435 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 DUSP7Q16829 419 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 DEFB136Q30KP8 78 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 TRMT12Q53H54 448 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 ERICH5Q6P6B1 374 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SASS6Q6UVJ0 657 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 ACP7Q6ZNF0 438 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PGAP1Q75T13 922 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PEX26Q7Z412 305 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 THOC6Q86W42 341 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 TCAIMQ8N3R3 496 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PNKDQ8N490 385 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 GATSQ8NAP1 163 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PROKR2Q8NFJ6 384 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 OR9G4Q8NGQ1 327 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 LRRC20Q8TCA0 184 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 RPS4Y2Q8TD47 263 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 CERS2Q96G23 380 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 OPALINQ96PE5 141 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 KCNA7Q96RP8 456 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 KCTD14Q9BQ13 255 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 MS4A8Q9BY19 250 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 BCL2L14Q9BZR8 327 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 PLGRKTQ9HBL7 147 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 DAZ3Q9NR90 486 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 AIG1Q9NVV5 245 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 AHSPQ9NZD4 102 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 FBXO5Q9UKT4 447 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC22A14Q9Y267 594 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 RHBDD3Q9Y3P4 386 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
TOPBP1-208ENST00000511439 SORL1Q92673 2214 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms