RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 LYRM2Q9NU23 88 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 MTCH1Q9NZJ7 389 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 MPC1Q9Y5U8 109 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 A0A1W2PR80 420 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 CRYBA1P05813 215 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 VDAC1P21796 283 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 CCNOP22674 350 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 GNLYP22749 145 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 S100GP29377 79 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 HERPUD1Q15011 391 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 NMSQ5H8A3 153 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 SPIN3Q5JUX0 258 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF818PQ6ZRF7 136 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 GAPTQ8N292 157 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 C17orf78Q8N4C9 275 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 OR5P3Q8WZ94 311 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 IFT22Q9H7X7 185 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 JKAMPQ9P055 326 aa13.6□□□□□ -0.23
SQSTM1-213ENST00000510187 CD300LBA8K4G0 201 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 SCTP09683 121 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF880Q6PDB4 577 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 MDP1Q86V88 176 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 PKIBQ9C010 78 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 CRIM1Q9NZV1 1036 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 RELNP78509 3460 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 IGSF23A1L1A6 192 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 BTBD17A6NE02 478 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 ANKRD30BLA7E2S9 258 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 HSPA12AO43301 675 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 IFNA4P05014 189 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 SLC25A6P12236 298 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 CHRNB4P30926 498 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 VAMP2P63027 116 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 GNG3P63215 75 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 ADORA2A-AS1P86434 159 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 FAM27E3Q08E93 113 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 IL24Q13007 206 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 RNF212Q495C1 297 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 HSD17B11Q8NBQ5 300 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 LILRB1Q8NHL6 650 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 MRPL30Q8TCC3 161 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 CABLES2Q9BTV7 478 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 ELOVL5Q9NYP7 299 aa13.59□□□□□ -0.23
SQSTM1-213ENST00000510187 IGKV1D-13A0A0B4J2D9 117 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 LRP5LA4QPB2 252 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 OR5H1A6NKK0 313 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 NPIPB11E5RHQ5 1161 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 ADAM20O43506 726 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 IGKV1-13P0DP09 117 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 RAB5BP61020 215 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 ID3Q02535 119 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 RHEBQ15382 184 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 OR8G1Q15617 311 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 TMEM252Q8N6L7 170 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 SUMF2Q8NBJ7 301 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 EIF5A2Q9GZV4 153 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 PARP12Q9H0J9 701 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.24
SQSTM1-213ENST00000510187 PCNX1Q96RV3 2341 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 IGKV1-6A0A0C4DH72 117 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 FAM24AA6NFZ4 105 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 J3QW42 95 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 PRKACAP17612 351 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 APLNRP35414 380 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 POLR2GP62487 172 aaKnown RBP eCLIP13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 HLA-DRB3P79483 266 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 TMEM182Q6ZP80 229 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 BATF2Q8N1L9 274 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 HS3ST6Q96QI5 342 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
SQSTM1-213ENST00000510187 DEGS1O15121 323 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 SYNGR1O43759 233 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 SSSCA1O60232 199 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 MT-ND4LP03901 98 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 CCL2P13500 99 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 AWAT1Q58HT5 328 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 MOB1BQ7L9L4 216 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 PLPPR1Q8TBJ4 325 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 C14orf79Q96F83 325 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 ERRFI1Q9UJM3 462 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 FAM90A27PA6NNH2 459 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 C16orf97H3BN30 126 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 J3QT63 122 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 PGLYRP1O75594 196 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 AGFG2O95081 481 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms