RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 RRADP55042 308 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 SMAD2Q15796 467 aaKnown RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 CEACAM16Q2WEN9 425 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TM4SF20Q53R12 229 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GDF7Q7Z4P5 450 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TMEM25Q86YD3 366 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CLECL1Q8IZS7 167 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 OR52N5Q8NH56 324 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR4A5Q8NH83 315 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 PHLDA1Q8WV24 401 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 CLDN23Q96B33 292 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 IP6K3Q96PC2 410 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FBXL15Q9H469 300 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 EDA2RQ9HAV5 297 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 LPAR2Q9HBW0 351 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 LYRM4Q9HD34 91 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 NTMQ9P121 344 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 HS3ST3B1Q9Y662 390 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 RGPD2P0DJD1 1756 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CTSVO60911 334 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZNF324O75467 553 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 CTAG2O75638 210 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GPR75O95800 540 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 WNT1P04628 370 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 LGALS2P05162 132 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FBXO45P0C2W1 286 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 PIRTP0C851 137 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 SNHG28P0DPA3 235 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 PLNP26678 52 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZP1P60852 638 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 EFNB1P98172 346 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C17orf67Q0P5P2 114 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZNF658BQ4V348 819 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 PRRT3Q5FWE3 981 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TMEM240Q5SV17 173 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TPTE2P1Q5T6R2 138 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C6orf15Q6UXA7 325 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 KIR3DL3Q8N743 410 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR11H7Q8NGC8 314 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 SLC25A40Q8TBP6 338 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZNF418Q8TF45 676 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 KIR2DL4Q99706 377 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 HSD17B10Q99714 261 aaKnown RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 PLA2G12AQ9BZM1 189 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FZD8Q9H461 694 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 TIMM10BQ9Y5J6 103 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 LRRC37AA6NMS7 1700 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 IZUMO1RA6ND01 250 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 VWC2LB2RUY7 222 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GGTLC3B5MD39 225 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CLDN5O00501 218 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FGF17O60258 216 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 PRKNO60260 465 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 KLRK1P26718 216 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 DYNLT3P51808 116 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 MFAP2P55001 183 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CCL23P55773 120 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 RAC3P60763 192 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TAF10Q12962 218 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ANKRD39Q53RE8 183 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 LHX8Q68G74 356 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ASPHD2Q6ICH7 369 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C22orf39Q6P5X5 142 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TEPPQ6URK8 271 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 STPG3Q8N7X2 389 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR4D11Q8NGI4 311 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FBXO27Q8NI29 283 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TMEM230Q96A57 120 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 APIPQ96GX9 242 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 TLNRD1Q9H1K6 362 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 R4GN57 208 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 UPK2O00526 184 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TGFAP01135 160 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SRFP11831 508 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TDGF1P13385 188 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 GLULP15104 373 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RUNX1Q01196 453 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TCF15Q12870 199 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SLAQ13239 276 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 IL17AQ16552 155 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 H1FNTQ75WM6 255 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 PRSS45Q7RTY3 260 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 HIST3H2BBQ8N257 126 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ARIH2OSQ8N7S6 290 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 KISS1RQ969F8 398 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 GPR146Q96CH1 333 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PLEKHB2Q96CS7 222 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 C14orf144Q96I85 54 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ZNF385AQ96PM9 386 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 RBM24Q9BX46 236 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 FAM117AQ9C073 453 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 STRADBQ9C0K7 418 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 LAT2Q9GZY6 243 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CSTL1Q9H114 145 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CHST8Q9H2A9 424 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TAS2R4Q9NYW5 299 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 THAP10Q9P2Z0 257 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms