RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TMEM210A6NLX4 147 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 HSPA12AO43301 675 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 TSPAN9O75954 239 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 WNT2P09544 360 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 F2RP25116 425 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 NHLH2Q02577 135 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 MIDNQ504T8 468 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 SHEQ5VZ18 495 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 CLEC9AQ6UXN8 241 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 BSCL2Q96G97 398 aaPredicted RBP9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 ADAT1Q9BUB4 502 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 PBDC1Q9BVG4 233 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
PRPF40B-203ENST00000508736 BSNQ9UPA5 3926 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 USP24Q9UPU5 2620 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 UMAD1C9J7I0 102 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 PGLYRP1O75594 196 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 HEXAP06865 529 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 SERPINE2P07093 398 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 CECR9P0C854 216 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 SLC25A6P12236 298 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 KITLGP21583 273 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 SNCAP37840 140 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 PSG7Q13046 419 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 TIMM23BQ5SRD1 257 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 PCSK4Q6UW60 755 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 HSD17B11Q8NBQ5 300 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 CACFD1Q9UGQ2 172 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 SLC25A15Q9Y619 301 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 GTF3C1Q12789 2109 aa9.78□□□□□ -0.84
PRPF40B-203ENST00000508736 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 RHBDL1O75783 438 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 NPBWR1P48145 328 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 TDGF1P3P51864 188 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 ERVK11-1P61568 191 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 LY6DQ14210 128 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 OR8G1Q15617 311 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 Q6P435 159 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 CBLN2Q8IUK8 224 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 SCCPDHQ8NBX0 429 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 OR10V1Q8NGI7 309 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 RNASE11Q8TAA1 199 aaKnown RBP9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.85
PRPF40B-203ENST00000508736 IGHV2OR16-5A0A0B4J2B6 119 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 IGHV1-18A0A0C4DH31 117 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 A0A1B0GU03 582 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 IGSF23A1L1A6 192 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 SH2D1BO14796 132 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 AGFG2O95081 481 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 NXPH2O95156 264 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 ERVS71-1P61550 626 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 ID3Q02535 119 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 GUK1Q16774 197 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 HFEQ30201 348 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 ZNF497Q6ZNH5 498 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 C20orf204Q6ZNR8 217 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 TMEM252Q8N6L7 170 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 OR8G5Q8NG78 346 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 IL1F10Q8WWZ1 152 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 SH3BGRL3Q9H299 93 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 LIN7CQ9NUP9 197 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 MLXQ9UH92 298 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 ERRFI1Q9UJM3 462 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 TRAPPC2LQ9UL33 140 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 PRELID1Q9Y255 219 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 FAM157AC9JC47 383 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 SIRPB1O00241 398 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 TNFSF12O43508 249 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 OR2H2O95918 312 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 F12P00748 615 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 PGA5P0DJD9 388 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 PPT1P50897 306 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 CLINT1Q14677 625 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 ZNF474Q6S9Z5 364 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 TMEM182Q6ZP80 229 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 WDR86Q86TI4 376 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 STX12Q86Y82 276 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 Q8NA96 180 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 PARP12Q9H0J9 701 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 MAGT1Q9H0U3 335 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 TAAR3PQ9P1P4 343 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 PRELID3BQ9Y3B1 194 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 CACNA1BQ00975 2339 aa9.76□□□□□ -0.85
PRPF40B-203ENST00000508736 BTBD17A6NE02 478 aa9.75□□□□□ -0.85
PRPF40B-203ENST00000508736 RNF212BA8MTL3 300 aa9.75□□□□□ -0.85
PRPF40B-203ENST00000508736 K7N7A8 449 aa9.75□□□□□ -0.85
PRPF40B-203ENST00000508736 SLC33A1O00400 549 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms