RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C5orf24Q7Z6I8 188 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 TRAPPC6BQ86SZ2 158 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 TMEM219Q86XT9 240 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 Q8IYB0 196 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 SAXO1Q8IYX7 474 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 OR52N1Q8NH53 320 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 RFESDQ8TAC1 157 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 PIFOQ8TCI5 191 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 RPS4Y2Q8TD47 263 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 LEAP2Q969E1 77 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 TMEM203Q969S6 136 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 TMEM106AQ96A25 262 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 SPSB1Q96BD6 273 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 OR5M11Q96RB7 305 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 MYCBPQ99417 103 aaPredicted RBP3.65□□□□□ -1.83
NUP54-206ENST00000508465 SSX3Q99909 188 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 FAM192AQ9GZU8 254 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 SLITRK2Q9H156 845 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 PPIL3Q9H2H8 161 aaKnown RBP3.65□□□□□ -1.83
NUP54-206ENST00000508465 EXOSC4Q9NPD3 245 aaKnown RBP3.65□□□□□ -1.83
NUP54-206ENST00000508465 C8orf4Q9NR00 106 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 PLCXD1Q9NUJ7 323 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 ZNRD1Q9P1U0 126 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 HILPDAQ9Y5L2 63 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 HSPE1-MOB4S4R3N1 261 aa3.65□□□□□ -1.83
NUP54-206ENST00000508465 TRRAPQ9Y4A5 3859 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 KIAA2026Q5HYC2 2103 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 TRAV24A0A0B4J272 114 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 TRBV5-5A0A0J9YX44 114 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 hCG_1809904A0A1W2PP81 198 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 A0A1W2PPE2 198 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 A0A1W2PR64 198 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 A0A1W2PRV1 198 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 hADV38S2A0JD32 116 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ODAMA1E959 279 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SH2D7A6NKC9 451 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 H0YJX3 145 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SLC33A1O00400 549 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 GEMIN2O14893 280 aaKnown RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 KDM4BO94953 1096 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 MAS1P04201 325 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ALDOBP05062 364 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CDK1P06493 297 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CD2P06729 351 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 IGHV1-8P0DP01 117 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CDK2P24941 298 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 NFYBP25208 207 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 BDKRB2P30411 391 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ZNF93P35789 620 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 PPP3R1P63098 170 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 MEF2CQ06413 473 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 ACSM1Q08AH1 577 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 MRPL28Q13084 256 aaKnown RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 MED21Q13503 144 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ATXN7L3Q14CW9 347 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 MED22Q15528 200 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 FAM189A2Q15884 450 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SLC22A6Q4U2R8 563 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ACSM3Q53FZ2 586 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 PAN3Q58A45 887 aaKnown RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 KRBOX4Q5JUW0 171 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 DDI2Q5TDH0 399 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SLC35E4Q6ICL7 350 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CCBE1Q6UXH8 406 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 ASCL4Q6XD76 172 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 Q6ZSV7 163 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ABHD12Q8N2K0 398 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 JAGN1Q8N5M9 183 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 UBALD1Q8TB05 177 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CCDC107Q8WV48 283 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 MYDGFQ969H8 173 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SMIM19Q96E16 107 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 RBMXL1Q96E39 390 aaKnown RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 COQ2Q96H96 371 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ZNF714Q96N38 554 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ZNF184Q99676 751 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 TMED9Q9BVK6 235 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ELOVL1Q9BW60 279 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CCDC90BQ9GZT6 254 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 METTL9Q9H1A3 318 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 VCXQ9H320 206 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 DPAGT1Q9H3H5 408 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 BANF2Q9H503 90 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 SEBOXQ9HB31 216 aaPredicted RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 BEX1Q9HBH7 125 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 TMEM138Q9NPI0 162 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 FKBP14Q9NWM8 211 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 PPP1R14DQ9NXH3 145 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 CNOT2Q9NZN8 540 aaKnown RBP3.64□□□□□ -1.83
NUP54-206ENST00000508465 KIF25Q9UIL4 384 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 ERGIC3Q9Y282 383 aa3.64□□□□□ -1.83
NUP54-206ENST00000508465 MEIKINA0A087WXM9 373 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 BTBD17A6NE02 478 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 H0YHG0 523 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 MYL12BO14950 172 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CHST1O43916 411 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 GPX5O75715 221 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms