RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PLEKHJ1Q9NW61 149 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 AUP1Q9Y679 476 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 MED12LQ86YW9 2145 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 HELZ2Q9BYK8 2649 aaKnown RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 OR6C6A6NF89 314 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TGOLN2O43493 480 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ABOP16442 354 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 OTX1P32242 354 aaPredicted RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 CLDN12P56749 244 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 UBE2MP61081 183 aaKnown RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 P2RY6Q15077 328 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TAF13Q15543 124 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ODF4Q2M2E3 257 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 DRAM2Q6UX65 266 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 Q6ZSR3 168 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 Q6ZT83 130 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 C1orf174Q8IYL3 243 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 SPAG16Q8N0X2 631 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 OR10AC1Q8NH08 325 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 SMIM4Q8WVI0 70 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 SLC25A38Q96DW6 304 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 S100A16Q96FQ6 103 aaKnown RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 RNF170Q96K19 258 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 POM121L2Q96KW2 1035 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ALKBH3Q96Q83 286 aaPredicted RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 RSG1Q9BU20 258 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 SLC7A10Q9NS82 523 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 GAR1Q9NY12 217 aaKnown RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 OR5V1Q9UGF6 321 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 WDR83OSQ9Y284 106 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 MEMO1Q9Y316 297 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TRAV8-7A0A075B6U6 113 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 A0A087X0K7 114 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 A0A1B0GV72 72 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 GAGE12BA1L429 117 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 GAGE12HA6NDE8 117 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 DHRS7CA6NNS2 312 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 H0Y980 276 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 K7EM74 188 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 MPPED1O15442 326 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 MAS1P04201 325 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 UQCRFS1P47985 274 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 IDH3GP51553 393 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 ERVK11-1P61568 191 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 PLA2G7Q13093 441 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RAB31Q13636 194 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 OR2B11Q5JQS5 317 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 GGNBP1Q5YKI7 109 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TFAP2EQ6VUC0 442 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TCTE3Q8IZS6 198 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 OR52H1Q8NGJ2 320 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 OR1K1Q8NGR3 316 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 SYNPRQ8TBG9 265 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM18Q96B42 140 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 SPAG8Q99932 426 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 PNRC2Q9NPJ4 139 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 COPZ2Q9P299 210 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 PROCRQ9UNN8 238 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 PIGLQ9Y2B2 252 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 ETV7Q9Y603 341 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 M0QZK8 103 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 MGST3O14880 152 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 DLEU1O43261 78 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 MPZL1O95297 269 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 CD2P06729 351 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 EGR2P11161 476 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 COX5AP20674 150 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 CCL1P22362 96 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 OPRM1P35372 400 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RAB25P57735 213 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 ZP1P60852 638 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RRAS2P62070 204 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RANP62826 216 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TLE4Q04727 773 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 KLF9Q13886 244 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 GABRA6Q16445 453 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 LY6G6FQ5SQ64 297 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 BCL2L15Q5TBC7 163 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 WDR25Q64LD2 544 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 LPCAT3Q6P1A2 487 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF585AQ6P3V2 769 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 GFRALQ6UXV0 394 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RBMS3Q6XE24 437 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 SLC16A14Q7RTX9 510 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 NUFIP2Q7Z417 695 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 RNASEH2CQ8TDP1 164 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 CDH20Q9HBT6 801 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 FAM206AQ9NX38 181 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 OR52A1Q9UKL2 312 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 HHLA2Q9UM44 414 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 PSG11Q9UQ72 335 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 AMDHD2Q9Y303 409 aa5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TLN1Q9Y490 2541 aaKnown RBP5.99□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM269A0A1B0GVZ9 245 aa5.98□□□□□ -1.45
CLCN3-206ENST00000507875 H3BSH0 61 aa5.98□□□□□ -1.45
CLCN3-206ENST00000507875 GABARAPH6UMI1 98 aa5.98□□□□□ -1.45
CLCN3-206ENST00000507875 K7EN84 100 aa5.98□□□□□ -1.45
CLCN3-206ENST00000507875 SYNGR3O43761 229 aa5.98□□□□□ -1.45
CLCN3-206ENST00000507875 MMP7P09237 267 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-206ENST00000507875 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms