RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 FPR2P25090 351 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 PSMB6P28072 239 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 PYCR1P32322 319 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 CD200P41217 278 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 HILS1P60008 231 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 LCN2P80188 198 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 CRMP1Q14194 572 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 FAM189A2Q15884 450 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 Q499Y3 187 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 STEAP1BQ6NZ63 245 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 PLBD1Q6P4A8 553 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 OR5AS1Q8N127 324 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 CYB561A3Q8NBI2 242 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 OR4C16Q8NGL9 310 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 OR10S1Q8NGN2 331 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 Q8TCH9 128 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 MITD1Q8WV92 249 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 FOXRED1Q96CU9 486 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF799Q96GE5 643 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 NUDT16L1Q9BRJ7 211 aaKnown RBP6.7□□□□□ -1.34
SCN1A-207ENST00000507401 PBDC1Q9BVG4 233 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 SUCNR1Q9BXA5 334 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 WDR76Q9H967 626 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 RHOFQ9HBH0 211 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 BEX1Q9HBH7 125 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 ADGRL4Q9HBW9 690 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 INSIG2Q9Y5U4 225 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 SIRT4Q9Y6E7 314 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-207ENST00000507401 U3KQE9 123 aa6.7□□□□□ -1.34
SCN1A-207ENST00000507401 ARHGAP32A7KAX9 2087 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 CD300LBA8K4G0 201 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 TRAPPC2LH3BP13 241 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 VENTXO95231 258 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 CYB5AP00167 134 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 GTF2F2P13984 249 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 IRF2P14316 349 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 DCTDP32321 178 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 NPBWR1P48145 328 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 GRB2P62993 217 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 DLK1P80370 383 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF92Q03936 586 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 PAX8Q06710 450 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 MZT1Q08AG7 82 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF154Q13106 437 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 TAF13Q15543 124 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 RNASE10Q5GAN6 216 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 LY6G6FQ5SQ64 297 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 LINC01590Q5TEZ4 76 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 PRSS45Q7RTY3 260 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 MRPL21Q7Z2W9 205 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 FAM220AQ7Z4H9 259 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 LYG2Q86SG7 212 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SLC25A42Q86VD7 318 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 IZUMO1Q8IYV9 350 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 PNLDC1Q8NA58 520 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 BHLHE23Q8NDY6 225 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 DEFB108BQ8NET1 73 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SEMA6DQ8NFY4 1073 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 OR10AD1Q8NGE0 317 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 OR51L1Q8NGJ5 315 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 OR11L1Q8NGX0 322 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 TERB2Q8NHR7 220 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 LYPD6BQ8NI32 183 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 GPX8Q8TED1 209 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 FAM216AQ8WUB2 273 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SPSB4Q96A44 273 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SLAMF6Q96DU3 332 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 AQP10Q96PS8 301 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 DERL3Q96Q80 235 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 METTL9Q9H1A3 318 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 ATG5Q9H1Y0 275 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 SIRT7Q9NRC8 400 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 MRPL15Q9P015 296 aaKnown RBP6.69□□□□□ -1.34
SCN1A-207ENST00000507401 KLK11Q9UBX7 282 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 OR5V1Q9UGF6 321 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 STEAP1Q9UHE8 339 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 PPIAL4AQ9Y536 164 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 DOCK11Q5JSL3 2073 aa6.69□□□□□ -1.34
SCN1A-207ENST00000507401 A0A087WWC5 75 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 KIR2DS1A0A191URI9 304 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 TMEM272A0A1B0GTI8 110 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 CEACAM18A8MTB9 384 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF705EA8MWA4 302 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF878C9JN71 531 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 XRCC2O43543 280 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 SYT7O43581 403 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 JTBO76095 146 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 GLCEO94923 617 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 DUS4LO95620 317 aaKnown RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 RAB3DO95716 219 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 CYB5R3P00387 301 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 ANXA2P07355 339 aaKnown RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 OR8U8P0C7N1 319 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 SELLP14151 372 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 PSMB10P40306 273 aa6.68□□□□□ -1.34
SCN1A-207ENST00000507401 RPS27P42677 84 aaKnown RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 COMPP49747 757 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-207ENST00000507401 SULT1A2P50226 295 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms