RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MND1Q9BWT6 205 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MRPL32Q9BYC8 188 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PRRG3Q9BZD7 231 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC19A3Q9BZV2 496 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 ALX4Q9H161 411 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 XKR8Q9H6D3 395 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 IFT46Q9NQC8 304 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 NXT1Q9UKK6 140 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 RBMX2Q9Y388 322 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 WASHC3Q9Y3C0 194 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 TBL2Q9Y4P3 447 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MTCH2Q9Y6C9 303 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 NUP153P49790 1475 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 NUMA1Q14980 2115 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 LOC100506127A0A0U1RQW1 187 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGSF23A1L1A6 192 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 EFCAB9A8MZ26 197 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF879B4DU55 563 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 H3BSA7 217 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 K7EQS6 105 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 LIN7AO14910 233 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 TRAPPC3O43617 180 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 UGT2B11O75310 529 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 LTAP01374 205 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCL2P13500 99 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 CTSEP14091 401 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 GABRA3P34903 492 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 SPAM1P38567 509 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 LPAR6P43657 344 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 KCNJ3P48549 501 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 EMP2P54851 167 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 AQP5P55064 265 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 GABARAPL2P60520 117 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC35A2P78381 396 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 XIAPP98170 497 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF117Q03924 483 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 STX3Q13277 289 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 PDK2Q15119 407 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4D1Q15615 310 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR8G1Q15617 311 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 EXOC3L4Q17RC7 722 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 TMEM249Q2WGJ8 235 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 Q3ZCU0 254 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 TTC33Q6PID6 262 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 CDRT4Q8N9R6 151 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR9I1Q8NGQ6 314 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR5K1Q8NHB7 308 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 ERMNQ8TAM6 284 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCDC12Q8WUD4 166 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 C19orf60Q96EN9 201 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 MBOAT7Q96N66 472 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 UGT2B28Q9BY64 529 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 POTEKPQ9BYX7 375 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 FBXL15Q9H469 300 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 DMAC2Q9NW81 257 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 TAS2R13Q9NYV9 303 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 MAT2BQ9NZL9 334 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 CHMP5Q9NZZ3 219 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 TMEM216Q9P0N5 145 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 SCML1Q9UN30 329 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSMD13Q9UNM6 376 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 ALG5Q9Y673 324 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 MINOS1-NBL1R4GNA1 71 aa0.59□□□□□ -2.31
HMGB1P29-201ENST00000505659 DICER1Q9UPY3 1922 aaKnown RBP0.59□□□□□ -2.32
HMGB1P29-201ENST00000505659 PTPRJQ12913 1337 aa0.59□□□□□ -2.32
HMGB1P29-201ENST00000505659 DSCAMO60469 2012 aa0.59□□□□□ -2.32
HMGB1P29-201ENST00000505659 KDM5BQ9UGL1 1544 aa0.59□□□□□ -2.32
HMGB1P29-201ENST00000505659 NAV1Q8NEY1 1877 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 KIAA0232Q92628 1395 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 RAB3GAP2Q9H2M9 1393 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 CHD5Q8TDI0 1954 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGKV1-12A0A0C4DH73 117 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGKV1D-12P01611 117 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 CRYGDP07320 174 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 ATP6V0CP27449 155 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 ETV1P50549 477 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 RWDD2BP57060 319 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 GTF2BQ00403 316 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 XRCC4Q13426 336 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 RAB31Q13636 194 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 HTR4Q13639 388 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SYCP1Q15431 976 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 FAM229BQ4G0N7 80 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 HENMT1Q5T8I9 393 aaKnown RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 AADACL4Q5VUY2 407 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SDIM1Q6ZPB5 146 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 FAM19A3Q7Z5A8 133 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 MTERF4Q7Z6M4 381 aaKnown RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLC13A5Q86YT5 568 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZFAND2AQ8N6M9 145 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR5D18Q8NGL1 313 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR4P4Q8NGL7 312 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR11L1Q8NGX0 322 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR10A6Q8NH74 314 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR5P2Q8WZ92 322 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF75CPQ92670 426 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 RORBQ92753 470 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 TMBIM1Q969X1 311 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 CCDC127Q96BQ5 260 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms