RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ELF5Q9UKW6 265 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 FAM96BQ9Y3D0 163 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 DPPA5A6NC42 116 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 FAM172BPA6NC97 362 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 TRDCB7Z8K6 153 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 J3QR06 171 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 TOR1AO14656 332 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 FBP1P09467 338 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 ELK1P19419 428 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 GNG2P59768 71 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 HLA-DRB3P79483 266 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 LY6G6FQ5SQ64 297 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 TMEM69Q5SWH9 247 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 UTF1Q5T230 341 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 RBMS3Q6XE24 437 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 C5orf24Q7Z6I8 188 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 OR4P4Q8NGL7 312 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 CREB3L1Q96BA8 519 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 DGCR14Q96DF8 476 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 MALSU1Q96EH3 234 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 OR2S2Q9NQN1 319 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 PSG11Q9UQ72 335 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 CUBNO60494 3623 aa9.66□□□□□ -0.86
PDLIM5-208ENST00000504489 IGHV3-43A0A0B4J1X8 118 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 MDFIC2A0A1B0GVS7 189 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 TCF21O43680 179 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 SSX5O60225 188 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 YPEL1O60688 119 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 TPPPO94811 219 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 IGHV3-43DP0DP04 118 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 HTR1DP28221 377 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 MNDAP41218 407 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 KIR2DS4P43632 304 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 TAS2R20P59543 309 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 HILS1P60008 231 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 KIR2DS1Q14954 304 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 HLA-DRB5Q30154 266 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 MORN2Q502X0 79 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 LDLRAD2Q5SZI1 272 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 STEAP3Q658P3 488 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 Q6YL49 198 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 LHFPL4Q7Z7J7 247 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 PRIMA1Q86XR5 153 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 LDLRAD3Q86YD5 345 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 IZUMO1Q8IYV9 350 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 LINC00311Q8N616 119 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 OR4A4PQ8NGN8 299 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 NUDCD2Q8WVJ2 157 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 YPEL2Q96QA6 119 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 JMJD8Q96S16 334 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 NXF2Q9GZY0 626 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 DPM3Q9P2X0 92 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 GNG12Q9UBI6 72 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
PDLIM5-208ENST00000504489 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 LY6LH3BQJ8 138 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 CTDSP2O14595 271 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 RGS5O15539 181 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 FABP7O15540 132 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 RGS11O94810 467 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 DIRAS3O95661 229 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 HLA-DQB1P01920 261 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 SCTP09683 121 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 CEACAM3P40198 252 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 FAM53AQ6NSI3 398 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 DTX3Q8N9I9 347 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNF439Q8NDP4 499 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 OR52L2PQ8NGH6 319 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 IL1F10Q8WWZ1 152 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 LEAP2Q969E1 77 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 MMP28Q9H239 520 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNRD1Q9P1U0 126 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNF230Q9UIE0 474 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 ADAM30Q9UKF2 790 aa9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 AMMECR1Q9Y4X0 333 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-208ENST00000504489 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 CLDN34H7C241 214 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 ITGB1BP1O14713 200 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 ZBTB25P24278 435 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 CBX5P45973 191 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 GNG10P50151 68 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 BAMBIQ13145 260 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 GNMTQ14749 295 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 AANATQ16613 207 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 CT45A1Q5HYN5 189 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 SLC25A48Q6ZT89 311 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 LAX1Q8IWV1 398 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms