RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PHF21AQ96BD5 680 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 NOL4LQ96MY1 436 aaPredicted RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 TMED9Q9BVK6 235 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 ANKRD65E5RJM6 399 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 PDCD6O75340 191 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 SC5DO75845 299 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 MPIG6BO95866 241 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 SLC6A1P30531 599 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 PNLIPRP3Q17RR3 467 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 MORN2Q502X0 79 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 FAM53AQ6NSI3 398 aaPredicted RBP9.45□□□□□ -0.9
MED28-203ENST00000503945 TEX38Q6PEX7 206 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 ZNF554Q86TJ5 538 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 IZUMO1Q8IYV9 350 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 OR10V1Q8NGI7 309 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 KCNG3Q8TAE7 436 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 PHYHIPQ92561 330 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 GALMQ96C23 342 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 Q96M66 194 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 ABCG5Q9H222 651 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 LIN7CQ9NUP9 197 aaKnown RBP9.45□□□□□ -0.9
MED28-203ENST00000503945 TPRKBQ9Y3C4 175 aa9.45□□□□□ -0.9
MED28-203ENST00000503945 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 NUDT19A8MXV4 375 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 ZNF736B4DX44 427 aaPredicted RBP9.44□□□□□ -0.9
MED28-203ENST00000503945 AP4M1O00189 453 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 RGS11O94810 467 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 RPL23AP62750 156 aaKnown RBP9.44□□□□□ -0.9
MED28-203ENST00000503945 HSD17B12Q53GQ0 312 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 SIGIRRQ6IA17 410 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 STPG2Q8N412 459 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 S1PR3Q99500 378 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 FAAP24Q9BTP7 215 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 PLSCR3Q9NRY6 295 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 MBNL3Q9NUK0 354 aaKnown RBP9.44□□□□□ -0.9
MED28-203ENST00000503945 ABRACLQ9P1F3 81 aa9.44□□□□□ -0.9
MED28-203ENST00000503945 DNAH9Q9NYC9 4486 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 SLC31A2O15432 143 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
MED28-203ENST00000503945 YPEL1O60688 119 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 HSMCR30P0CW71 290 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 VSIG8P0DPA2 414 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 HTR2CP28335 458 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 SOX6P35712 828 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 MYCNOSP40205 109 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 GPR12P47775 334 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 F2RL1P55085 397 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 HTD2P86397 168 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 INSL4Q14641 139 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 RBM48Q5RL73 367 aaKnown RBP9.43□□□□□ -0.9
MED28-203ENST00000503945 VAX1Q5SQQ9 334 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 C1orf100Q5SVJ3 147 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 OR10K2Q6IF99 312 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 LRRTM1Q86UE6 522 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 Q8N6K4 173 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 Q8N9W7 124 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 UFD1Q92890 307 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 TMEM203Q969S6 136 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 YPEL2Q96QA6 119 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
MED28-203ENST00000503945 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 RIMS4Q9H426 269 aaPredicted RBP9.43□□□□□ -0.9
MED28-203ENST00000503945 PLEKHJ1Q9NW61 149 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
MED28-203ENST00000503945 RYR3Q15413 4870 aa9.43□□□□□ -0.9
MED28-203ENST00000503945 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 LANCL1O43813 399 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 BPNT1O95861 308 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 BLVRBP30043 206 aaPredicted RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 RANBP1P43487 201 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 THBS3P49746 956 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 ZNF137PP52743 207 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 GP2P55259 537 aaKnown RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 RPS27AP62979 156 aaKnown RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 TRAM1Q15629 374 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 LY6G6FQ5SQ64 297 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 FAM27D1Q5T7N8 215 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 LIPKQ5VXJ0 399 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 OR2W3Q7Z3T1 314 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 MRPL30Q8TCC3 161 aaKnown RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 DPF1Q92782 380 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 SULT4A1Q9BR01 284 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 URM1Q9BTM9 101 aaKnown RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 TMEM59Q9BXS4 323 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 CCDC90BQ9GZT6 254 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 DUSP21Q9H596 190 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 CHMP1AQ9HD42 196 aaPredicted RBP9.42□□□□□ -0.9
MED28-203ENST00000503945 STEAP1Q9UHE8 339 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 JPT1Q9UK76 154 aa9.42□□□□□ -0.9
MED28-203ENST00000503945 K7EIL1 84 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 RGS10O43665 173 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms