RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CRYM-AS1A6NIL9 109 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 RNF212BA8MTL3 300 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 NDUFS8O00217 210 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SNAPC5O75971 98 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 IFNA2P01563 188 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 TFF1P04155 84 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 WNT2P09544 360 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SULT1A3P0DMM9 295 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SULT1A4P0DMN0 295 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 RPS2P15880 293 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 CD34P28906 385 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 GNRHRP30968 328 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 RBMXP38159 391 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 CDKN1AP38936 164 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 PDLIM4P50479 330 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 PIGPP57054 158 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 BAMBIQ13145 260 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 PPP1R1AQ13522 171 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 TPRX1Q8N7U7 411 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 BVESQ8NE79 360 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 OR1L1Q8NH94 360 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SECTM1Q8WVN6 248 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 CAPSLQ8WWF8 208 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 IGFBPL1Q8WX77 278 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SUCNR1Q9BXA5 334 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 LIME1Q9H400 295 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 NAA60Q9H7X0 242 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 PATZ1Q9HBE1 687 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 SLC2A9Q9NRM0 540 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 GNG12Q9UBI6 72 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF221Q9UK13 617 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 DSCAMO60469 2012 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 TRAV39A0A0B4J263 110 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 MPPED1O15442 326 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 RBP4P02753 201 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 HNRNPCP07910 306 aaKnown RBP eCLIP6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 SELLP14151 372 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 PAX1P15863 534 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 HLA-GP17693 338 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 SSTR5P35346 364 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 DSCR9P59020 149 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 CYCSP99999 105 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 CARTPTQ16568 116 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 MORN2Q502X0 79 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 LYPD2Q6UXB3 125 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 HEPN1Q6WQI6 88 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 TCTE3Q8IZS6 198 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF645Q8N7E2 425 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 TCTEX1D1Q8N7M0 179 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 ADAD2Q8NCV1 583 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 OR2AK2Q8NG84 335 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 C8orf46Q8TAG6 207 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 H1FXQ92522 213 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 TMEM230Q96A57 120 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF714Q96N38 554 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 DCTN5Q9BTE1 182 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 IDI2-AS1Q9NZ38 188 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 OR1A1Q9P1Q5 309 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 CTSZQ9UBR2 303 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 GAB2Q9UQC2 676 aa6.73□□□□□ -1.33
TOPBP1-202ENST00000503338 IGKV1D-13A0A0B4J2D9 117 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1B0GW55 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUXBA0A1W2PPF3 345 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 A1L4Q6 167 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 F5H0A9 414 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 IFNA21P01568 189 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 GIPP09681 153 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L2P0CJ85 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L3P0CJ86 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L4P0CJ87 422 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L5P0CJ88 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L6P0CJ89 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L7P0CJ90 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 IGKV1-13P0DP09 117 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 PI3P19957 117 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LOXL3P58215 753 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RAP2BP61225 183 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 GNB2P62879 340 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 CATR1Q13166 79 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 FCN2Q15485 313 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 C17orf58Q2M2W7 97 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 PHLDA2Q53GA4 152 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ESCO2Q56NI9 601 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 WDR25Q64LD2 544 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4L9Q6RFH8 374 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF66Q6ZN08 573 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF841Q6ZN19 808 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF818PQ6ZRF7 136 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LDLRAD3Q86YD5 345 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LGI3Q8N145 548 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LRTM2Q8N967 370 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms