RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 DLX1P56177 255 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 PAX8Q06710 450 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 ACTBL2Q562R1 376 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 METTL11BQ5VVY1 283 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 CYB5R2Q6BCY4 276 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 FAAP20Q6NZ36 180 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 C16orf87Q6PH81 154 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZNF782Q6ZMW2 699 aaPredicted RBP16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 METTL8Q9H825 291 aaKnown RBP16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 CELSR1Q9NYQ6 3014 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 DIRAS3O95661 229 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 CEACAM6P40199 344 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 DYRK1AQ13627 763 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 GNMTQ14749 295 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 VAX1Q5SQQ9 334 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 UTF1Q5T230 341 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 GLCCI1Q86VQ1 547 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR52M1Q8NGK5 317 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR4C16Q8NGL9 310 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 GINS4Q9BRT9 223 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 SIRPDQ9H106 197 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 GFOD1Q9NXC2 390 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 GNG12Q9UBI6 72 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 ABCA1O95477 2261 aa16.71■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR10V1Q8NGI7 309 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 HRASLSQ9HDD0 168 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 SIRT7Q9NRC8 400 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 JPT1Q9UK76 154 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 FAM172BPA6NC97 362 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 PLA2G10O15496 165 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 TOX4O94842 621 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 IGHV3-7P01780 117 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 IFNA6P05013 189 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 MMP9P14780 707 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 GATA3P23771 443 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 PRTN3P24158 256 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 PPP1CCP36873 323 aaKnown RBP16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 PRB3Q04118 309 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 FAHD2BQ6P2I3 314 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 SPNS3Q6ZMD2 512 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 OR56B4Q8NH76 319 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 LEAP2Q969E1 77 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 FAHD2AQ96GK7 314 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 PCGF1Q9BSM1 259 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 TMPRSS13Q9BYE2 586 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 SESN1Q9Y6P5 492 aa16.7■□□□□ 0.26
CDC42SE2-206ENST00000503291 NFYAP23511 347 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 MEF2DQ14814 521 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 TMEM30BQ3MIR4 351 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 MORN2Q502X0 79 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 VMO1Q7Z5L0 202 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 DEDD2Q8WXF8 326 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 SUCNR1Q9BXA5 334 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 YPEL1O60688 119 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 AMY2AP04746 511 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 FCGR2CP31995 323 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 FAUP35544 74 aaKnown RBP16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 TSPAN5P62079 268 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 DHRS11Q6UWP2 260 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 YPEL2Q96QA6 119 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 SLC6A7Q99884 636 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 TMEM133Q9H2Q1 129 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 C7orf69Q9H7B7 122 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 UNKLQ9H9P5 680 aaKnown RBP16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 MCUBQ9NWR8 336 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 RDH8Q9NYR8 311 aa16.69■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF735P0CB33 412 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF16P17020 682 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF660Q6AZW8 331 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 H1FOOQ8IZA3 346 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 OR6F1Q8NGZ6 308 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 GIMAP1Q8WWP7 306 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 TBX15Q96SF7 602 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 PARP12Q9H0J9 701 aaKnown RBP16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 TBC1D24Q9ULP9 559 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 ACANP16112 2415 aa16.68■□□□□ 0.26
CDC42SE2-206ENST00000503291 A0A087X0M5 115 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 A0A1B0GX30 115 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 ARRDC1Q8N5I2 433 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 TNFRSF14Q92956 283 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 C18orf12Q96KH6 178 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 TOLLIPQ9H0E2 274 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF69Q9UC07 566 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 PSG11Q9UQ72 335 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 AUP1Q9Y679 476 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 CSPG4Q6UVK1 2322 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 DCTN2Q13561 401 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 OR51S1Q8NGJ8 323 aa16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF2Q9BSG1 426 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE2-206ENST00000503291 SVEP1Q4LDE5 3571 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 CENPXA8MT69 81 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 DISC1C4P0D8 188 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 TUSC2O75896 110 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 RGS11O94810 467 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 ZNF134P52741 427 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 SCGB2B2Q4G0G5 96 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 TMEM17Q86X19 198 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 ABHD12Q8N2K0 398 aa16.66■□□□□ 0.26
CDC42SE2-206ENST00000503291 HEXA-AS1Q9H8Q6 139 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms