RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GAPTQ8N292 157 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 PRR18Q8N4B5 295 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-204ENST00000503215 TFAP2CQ92754 450 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 Q96M66 194 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 NCBP2LA6PVI3 153 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 FGF16O43320 207 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 IGHG2P01859 326 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 CD1AP06126 327 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 GNMTQ14749 295 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 KCTD21Q4G0X4 260 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 UNQ9370/PRO34162Q6UXP9 181 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 SLC35E3Q7Z769 313 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 Q8N9W7 124 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 MRPS24Q96EL2 167 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 KCNK15Q9H427 330 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 MPIG6BO95866 241 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 FUT3P21217 361 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 CBX3Q13185 183 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 ACSM3Q53FZ2 586 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 LCNL1Q6ZST4 164 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 SLC25A48Q6ZT89 311 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 OR2W3Q7Z3T1 314 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 LRRTM1Q86UE6 522 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 MRPL41Q8IXM3 137 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 IZUMO1Q8IYV9 350 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 TSPAN14Q8NG11 270 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 OR52L2PQ8NGH6 319 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 YTHDF1Q9BYJ9 559 aaKnown RBP12.81□□□□□ -0.36
SCLT1-204ENST00000503215 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
SCLT1-204ENST00000503215 K7EIL1 84 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 SPINT2O43291 252 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 SC5DO75845 299 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 CDK1P06493 297 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 HOXD3P31249 432 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-204ENST00000503215 GPR12P47775 334 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 F2RL1P55085 397 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 STPG2Q8N412 459 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
SCLT1-204ENST00000503215 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 BORCS5Q969J3 196 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 DUX3Q96PT4 197 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
SCLT1-204ENST00000503215 LSM2Q9Y333 95 aaKnown RBP12.8□□□□□ -0.36
SCLT1-204ENST00000503215 A0A087WXM4 84 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 CD1BP29016 333 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 ZNF137PP52743 207 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 SLC35A2P78381 396 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 NKAPLQ5M9Q1 402 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 C6orf141Q5SZD1 244 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 C6orf183Q5T699 404 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 TGIF2LXQ8IUE1 241 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 SULT4A1Q9BR01 284 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 UQCC2Q9BRT2 126 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 ABCG5Q9H222 651 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 OR2S2Q9NQN1 319 aa12.79□□□□□ -0.36
SCLT1-204ENST00000503215 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 FAM90A10PA6NDY2 464 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 FAM90A7PA6NKC0 464 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 FAM90A23PA8MXZ1 464 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 PDCD6O75340 191 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 MOSP00540 346 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 PPP1CCP36873 323 aaKnown RBP12.78□□□□□ -0.36
SCLT1-204ENST00000503215 THBS3P49746 956 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 GPR50Q13585 617 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 NKAIN3Q8N8D7 197 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 RITA1Q96K30 269 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 S1PR3Q99500 378 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 FAAP24Q9BTP7 215 aa12.78□□□□□ -0.36
SCLT1-204ENST00000503215 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
SCLT1-204ENST00000503215 NUDT19A8MXV4 375 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 RPLP1P05386 114 aaKnown RBP12.77□□□□□ -0.37
SCLT1-204ENST00000503215 IL3RAP26951 378 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 CHATP28329 748 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 HTR2CP28335 458 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 Q3ZCU0 254 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 RNLSQ5VYX0 342 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 LINC00299Q6ZSB3 139 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 CEACAM19Q7Z692 300 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 FOXRED2Q8IWF2 684 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 ODF3L1Q8IXM7 274 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 RCC1LQ96I51 464 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms