RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 EMG1Q92979 244 aaKnown RBP4.38□□□□□ -1.71
HTT-202ENST00000502820 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 TMEM18Q96B42 140 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 GNPNAT1Q96EK6 184 aaPredicted RBP4.38□□□□□ -1.71
HTT-202ENST00000502820 TVP23CQ96ET8 276 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 C4orf45Q96LM5 186 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 DOCK7Q96N67 2140 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 IMMP2LQ96T52 175 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 P2RX4Q99571 388 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 PDCD1LG2Q9BQ51 273 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 WFDC6Q9BQY6 131 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 RNF126Q9BV68 326 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 RSPO3Q9BXY4 272 aaPredicted RBP4.38□□□□□ -1.71
HTT-202ENST00000502820 OR11A1Q9GZK7 315 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 EIF5A2Q9GZV4 153 aaKnown RBP4.38□□□□□ -1.71
HTT-202ENST00000502820 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 PLK3Q9H4B4 646 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 LAMP5Q9UJQ1 280 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 SLC7A11Q9UPY5 501 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 VSIG4Q9Y279 399 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 GOLT1BQ9Y3E0 138 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 HEATR5AQ86XA9 2040 aa4.38□□□□□ -1.71
HTT-202ENST00000502820 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 KIR2DL5BA0A0G2JN68 375 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 KIR2DL5BA0A0G2JPC4 375 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 FAM230AA0A1W2PPH8 454 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 A0A1W2PPQ1 181 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 A0A1W2PR64 198 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ZNF716A6NP11 495 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 FTCDNL1E5RQL4 147 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 DNPH1O43598 174 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 GPR137BO60478 399 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 DEDDO75618 318 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 MPZL1O95297 269 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 CYB5R3P00387 301 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 RENP00797 406 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 THY1P04216 161 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 OR4A8P0C604 315 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 HIST1H1CP16403 213 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 NDUFB7P17568 137 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 IGFBP3P17936 291 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 IGHV1-2P23083 117 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 PRTN3P24158 256 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 FKBP2P26885 142 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 HSD11B1P28845 292 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 NTF4P34130 210 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 GPR6P46095 362 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 MMP16P51512 607 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 IDH3GP51553 393 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 NDUFA6P56556 154 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 FAM3BP58499 235 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 LSM6P62312 80 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 CSNK2A1P68400 391 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 SRSF3P84103 164 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 ZP4Q12836 540 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 PMS2P11Q13670 270 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ATXN7L3Q14CW9 347 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 ELOBQ15370 118 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TAF9Q16594 264 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 C2orf76Q3KRA6 126 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ZNF260Q3ZCT1 412 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 KHDC3LQ587J8 217 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 MRPL2Q5T653 305 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 GGNBP1Q5YKI7 109 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TMEM225Q6GV28 225 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 PET117Q6UWS5 81 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 Q6ZT83 130 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 HMGN2P46Q86SG4 172 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 KIR2DL5AQ8N109 375 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TEX29Q8N6K0 151 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 NPEPL1Q8NDH3 523 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 OR10AD1Q8NGE0 317 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 OR51D1Q8NGF3 324 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 OR2D3Q8NGH3 330 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 CLDND2Q8NHS1 167 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 SECTM1Q8WVN6 248 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 DNAJA3Q96EY1 480 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 CPNE2Q96FN4 548 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 BSCL2Q96G97 398 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 MARS2Q96GW9 593 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 ALG12Q9BV10 488 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 C7orf69Q9H7B7 122 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 SRD5A3Q9H8P0 318 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 MOB1AQ9H8S9 216 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 MED20Q9H944 212 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 SERINC1Q9NRX5 453 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms