RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SRSF4Q08170 494 aaKnown RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 TMEM187Q14656 261 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 GNMTQ14749 295 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 Q5BKY6 102 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 TEX36Q5VZQ5 186 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 LAMTOR1Q6IAA8 161 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 DUX4L9Q6RFH8 374 aaPredicted RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 TBC1D26Q86UD7 250 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 TGIF2LYQ8IUE0 185 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 CMTM1Q8IZ96 169 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 LGI3Q8N145 548 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 ZCCHC24Q8N2G6 241 aaKnown RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 MUC15Q8N387 334 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 FAM216BQ8N7L0 139 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 ZNRF1Q8ND25 227 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 LILRB1Q8NHL6 650 aaPredicted RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 PPP1R1CQ8WVI7 109 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 ITLN2Q8WWU7 325 aaPredicted RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 GALMQ96C23 342 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 C14orf79Q96F83 325 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 SDSLQ96GA7 329 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 VRK1Q99986 396 aaPredicted RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 NMES1Q9C002 83 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 SHARPINQ9H0F6 387 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 CCL28Q9NRJ3 127 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 LIN7CQ9NUP9 197 aaKnown RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 CISD1Q9NZ45 108 aaKnown RBP6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 MBD2Q9UBB5 411 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
PDZRN3-212ENST00000498048 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 IGHV3-43A0A0B4J1X8 118 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 C3orf85A0A1B0GTC6 90 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 HMSDA8MTL9 139 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 K7N7A8 449 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 SIGLEC5O15389 551 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 MPPED1O15442 326 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 TNFSF12O43508 249 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 IGHV3-43DP0DP04 118 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 AGAP20933 346 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 SSTR2P30874 369 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 GNRHRP30968 328 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 S100A10P60903 97 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 CYCSP99999 105 aaKnown RBP6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 SP6Q3SY56 376 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 LDLRAD3Q86YD5 345 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 ZNF295-AS1Q8N0V1 137 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 DEFB108BQ8NET1 73 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 OR51H1Q8NH63 302 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 ARL11Q969Q4 196 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 LURAP1Q96LR2 239 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 TP53RKQ96S44 253 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 TMEM204Q9BSN7 226 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 GON7Q9BXV9 100 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 PARP12Q9H0J9 701 aaKnown RBP6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 FAM234AQ9H0X4 552 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 OR2D2Q9H210 308 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 RAB9BQ9NP90 201 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 TMEM106BQ9NUM4 274 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 OR6C3Q9NZP0 311 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 JPT1Q9UK76 154 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 UBE2J1Q9Y385 318 aaPredicted RBP6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 CACNA1BQ00975 2339 aa6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 HRNRQ86YZ3 2850 aaPredicted RBP6.73□□□□□ -1.33
PDZRN3-212ENST00000498048 IGSF10Q6WRI0 2623 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 PPIAL4EA0A075B759 164 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 TRGV10A0A0A0MS01 117 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 IGHV1-69-2A0A0G2JMI3 117 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 DUXBA0A1W2PPF3 345 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 MEX3AA1L020 520 aaKnown RBP6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 RNF212BA8MTL3 300 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 MPTX1A8MV57 137 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 PPIAL4DF5H284 164 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 TMEM178BH3BS89 294 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 RP2O75695 350 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 MPC2O95563 127 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 PPIAL4FP0DN26 164 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 RPA2P15927 270 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 CXCL2P19875 107 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 CEACAM6P40199 344 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 SMCO1Q147U7 214 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 LTC4SQ16873 150 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 IAH1Q2TAA2 248 aaPredicted RBP6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 LGALSLQ3ZCW2 172 aaPredicted RBP6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 TMEM268Q5VZI3 342 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 C11orf87Q6NUJ2 197 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 ZNF788Q6ZQV5 615 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 ZNF645Q8N7E2 425 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 SLC35G3Q8N808 338 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 LRTM2Q8N967 370 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 BVESQ8NE79 360 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 OR52L2PQ8NGH6 319 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 OR5D13Q8NGL4 314 aa6.72□□□□□ -1.33
PDZRN3-212ENST00000498048 RNASE11Q8TAA1 199 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms