RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 SAXO2Q658L1 398 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 C22orf42Q6IC83 251 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MED27Q6P2C8 311 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 HAGHLQ6PII5 290 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 WDR59Q6PJI9 974 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 DEGS2Q6QHC5 323 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ARL9Q6T311 187 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CLEC2AQ6UVW9 174 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TEX261Q6UWH6 196 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LRRN1Q6UXK5 716 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 NPSR1Q6W5P4 371 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ABHD13Q7L211 337 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 BHLHA15Q7RTS1 189 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 MRPL55Q7Z7F7 128 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 ANGPTL5Q86XS5 388 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 PHF13Q86YI8 300 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 KATNAL2Q8IYT4 538 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LGI3Q8N145 548 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 C4orf33Q8N1A6 199 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 STK40Q8N2I9 435 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SVBPQ8N300 66 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 METTL13Q8N6R0 699 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 PQLC3Q8N755 202 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ZNF709Q8N972 641 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 GPR26Q8NDV2 337 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ZNF555Q8NEP9 628 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 BPIFCQ8NFQ6 507 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR8J2Q8NGG1 315 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR13D1Q8NGV5 346 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR4K15Q8NH41 348 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR4S2Q8NH73 311 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TERB2Q8NHR7 220 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MCFD2Q8NI22 146 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 UBA3Q8TBC4 463 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 DTD1Q8TEA8 209 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ING5Q8WYH8 240 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 RORBQ92753 470 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SLC38A4Q969I6 547 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TMIGD2Q96BF3 282 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CMBLQ96DG6 245 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 L3HYPDHQ96EM0 354 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 NDFIP1Q9BT67 221 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 BCL2L14Q9BZR8 327 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 UCK2Q9BZX2 261 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR52A5Q9H2C5 316 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 OR51B6Q9H340 312 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TRABDQ9H4I3 376 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ELOVL6Q9H5J4 265 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 EXO5Q9H790 373 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TMEM185BQ9H7F4 350 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 KIR3DX1Q9H7L2 352 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ABCB9Q9NP78 766 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TMEM9BQ9NQ34 198 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LHX9Q9NQ69 397 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CHRAC1Q9NRG0 131 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SPANXA1Q9NS26 97 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MRPL22Q9NWU5 206 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 SCN3BQ9NY72 215 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 VAPAQ9P0L0 249 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 METTL1Q9UBP6 276 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 MARCOQ9UEW3 520 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 SLC22A14Q9Y267 594 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TPRKBQ9Y3C4 175 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ORC6Q9Y5N6 252 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 PUS1Q9Y606 427 aaKnown RBP eCLIP1.57□□□□□ -2.16
CBX3-208ENST00000497498 SLC22A7Q9Y694 548 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 U3KQ87 197 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 V9GYS6 101 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MIA3Q5JRA6 1907 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ATG2BQ96BY7 2078 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MUC22E2RYF6 1773 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 ASCC3Q8N3C0 2202 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 NLRC5Q86WI3 1866 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TANC1Q9C0D5 1861 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYO5AQ9Y4I1 1855 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYH3P11055 1940 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PLXNB3Q9ULL4 1909 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYH10P35580 1976 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 IGLV2-18A0A075B6J9 118 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 IGHV3-74A0A0B4J1X5 117 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 IGHV3-66A0A0C4DH42 116 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 C9orf170A2RU37 121 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FABP12A6NFH5 140 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR2AT4A6NND4 320 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 BBIP1A8MTZ0 92 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ZNF99A8MXY4 864 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 HACD1B0YJ81 288 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MKRN2OSH3BPM6 223 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 H7C1H1 209 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 M0R233 179 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PRMT5O14744 637 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 MRASO14807 208 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYL12BO14950 172 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RRP8O43159 456 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 CTNSO60931 367 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SCN2BO60939 215 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 KCNK2O95069 426 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SERPINA1P01009 418 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CSTAP01040 98 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms