RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.24□□□□□ -2.21
CD46-218ENST00000496723 LRRC45Q96CN5 670 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 CFAP53Q96M91 514 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 MED10Q9BTT4 135 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 ZNF286AQ9HBT8 521 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 TMEM216Q9P0N5 145 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 FBXL3Q9UKT7 428 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 WASHC3Q9Y3C0 194 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 FIS1Q9Y3D6 152 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 ICE1Q9Y2F5 2266 aa1.24□□□□□ -2.21
CD46-218ENST00000496723 ADAMTS7Q9UKP4 1686 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 C9J4A7 227 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 F5H5K5 113 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 M0QYV0 167 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 CDK14O94921 469 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 EPPINO95925 133 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 GP1BAP07359 652 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 NQO1P15559 274 aaKnown RBP1.23□□□□□ -2.21
CD46-218ENST00000496723 PVALBP20472 110 aaPredicted RBP1.23□□□□□ -2.21
CD46-218ENST00000496723 SYT1P21579 422 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 SULT1A2P50226 295 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 FAM3AP98173 230 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 PSG4Q00888 419 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 OR8G1Q15617 311 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 TMEM176BQ3YBM2 270 aaPredicted RBP1.23□□□□□ -2.21
CD46-218ENST00000496723 PCOTHQ58A44 107 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 HENMT1Q5T8I9 393 aaKnown RBP1.23□□□□□ -2.21
CD46-218ENST00000496723 CCDC121Q6ZUS5 278 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 VN1R4Q7Z5H5 301 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 OR5C1Q8NGR4 320 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 TAMM41Q96BW9 452 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 TMEM56Q96MV1 263 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 MED18Q9BUE0 208 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 CHST5Q9GZS9 411 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 CHMP4BQ9H444 224 aaKnown RBP1.23□□□□□ -2.21
CD46-218ENST00000496723 C11orf49Q9H6J7 331 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 ASCL3Q9NQ33 180 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 HSPE1-MOB4S4R3N1 261 aa1.23□□□□□ -2.21
CD46-218ENST00000496723 COL18A1P39060 1754 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 IGKV1-12A0A0C4DH73 117 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 IGSF23A1L1A6 192 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 SYNGR1O43759 233 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 IGKV1D-12P01611 117 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 KDELR2P33947 212 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 STC1P52823 247 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 DLX6P56179 175 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 XRCC4Q13426 336 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 CENPWQ5EE01 88 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 HES3Q5TGS1 186 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 EBLN2Q6P2I7 272 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 SDIM1Q6ZPB5 146 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 ZNF567Q8N184 647 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 NATD1Q8N6N6 113 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 ZNRF2Q8NHG8 242 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 RNASEH2CQ8TDP1 164 aaKnown RBP1.22□□□□□ -2.21
CD46-218ENST00000496723 SMIM12Q96EX1 92 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 CAPZA3Q96KX2 299 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 ACBD6Q9BR61 282 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 GTSF1LQ9H1H1 148 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 C1orf109Q9NX04 203 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 SCML1Q9UN30 329 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.22□□□□□ -2.21
CD46-218ENST00000496723 HELZ2Q9BYK8 2649 aaKnown RBP1.22□□□□□ -2.21
CD46-218ENST00000496723 NAV1Q8NEY1 1877 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 SLX4Q8IY92 1834 aa1.22□□□□□ -2.21
CD46-218ENST00000496723 GBF1Q92538 1859 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 TRGV4A0A0C4DH28 118 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 LOC102725191A0A1B0GVB3 256 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 C17orf98A8MV24 154 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 F8VZ95 297 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 MPZL2O60487 215 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 NEMFO60524 1076 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 PRB1P04280 392 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 CRYGDP07320 174 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 P0DMU3 169 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 FAM231AP0DMU4 169 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 FAM231CP0DMU5 169 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 CPMP14384 443 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 F8A1P23610 371 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 COILP38432 576 aaPredicted RBP1.21□□□□□ -2.22
CD46-218ENST00000496723 SLC35A2P78381 396 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 BSPH1Q075Z2 132 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 TRMT12Q53H54 448 aaKnown RBP1.21□□□□□ -2.22
CD46-218ENST00000496723 SCGB1D4Q6XE38 83 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 ZNF767PQ75MW2 155 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 SPATA24Q86W54 205 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 SELENOHQ8IZQ5 122 aaKnown RBP1.21□□□□□ -2.22
CD46-218ENST00000496723 C2orf73Q8N5S3 287 aaPredicted RBP1.21□□□□□ -2.22
CD46-218ENST00000496723 ZFAND2AQ8N6M9 145 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 OR4C16Q8NGL9 310 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 ERMNQ8TAM6 284 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 FAM210AQ96ND0 272 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 MND1Q9BWT6 205 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 NDEL1Q9GZM8 345 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 AICDAQ9GZX7 198 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 GLS2Q9UI32 602 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 DNAJC12Q9UKB3 198 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 SNX10Q9Y5X0 201 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 ALG5Q9Y673 324 aa1.21□□□□□ -2.22
CD46-218ENST00000496723 MTCH2Q9Y6C9 303 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms