RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RRNAD1Q96FB5 475 aaKnown RBP7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 FYTTD1Q96QD9 318 aaKnown RBP7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR52B2Q96RD2 323 aa7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 DCUN1D5Q9BTE7 237 aa7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 ALX4Q9H161 411 aaPredicted RBP7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 KLK15Q9H2R5 256 aa7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 KAT8Q9H7Z6 458 aaKnown RBP7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 HMG20AQ9NP66 347 aa7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 GLS2Q9UI32 602 aa7.32□□□□□ -1.24
SMARCAL1-213ENST00000496037 IGHV4OR15-8A0A075B7B6 117 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 A0A087WW49 117 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 A0A1W2PPI3 338 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 CTDSPLO15194 276 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 MPZL2O60487 215 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 NOS1APO75052 506 aaPredicted RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 HIST1H1CP16403 213 aaKnown RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 PRKACBP22694 351 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 DUSP1P28562 367 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 CD34P28906 385 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 PYCR1P32322 319 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 HAAOP46952 286 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 NUDT2P50583 147 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 PLCXD3Q63HM9 321 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 EPGNQ6UW88 154 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 HEPN1Q6WQI6 88 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 FUNDC1Q8IVP5 155 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR5A2Q8NGI9 324 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 FANK1Q8TC84 345 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 RAB2BQ8WUD1 216 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 TMEM170AQ8WVE7 144 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 TSEN15Q8WW01 171 aaKnown RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 RGP1Q92546 391 aaPredicted RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 TMEM106AQ96A25 262 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 SPAG8Q99932 426 aaPredicted RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 RASL11BQ9BPW5 248 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 NIPAL2Q9H841 368 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 HES4Q9HCC6 221 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 CHMP1AQ9HD42 196 aaPredicted RBP7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 ZNF319Q9P2F9 582 aa7.31□□□□□ -1.24
SMARCAL1-213ENST00000496037 TRGV10A0A0A0MS01 117 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 CBY3A6NI87 242 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 WRBO00258 174 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 FCGR3BO75015 233 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 ZNF254O75437 659 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 NDUFB8O95169 186 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 IGF1P05019 195 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 SPP1P10451 314 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 PSKH1P11801 424 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 EDN2P20800 178 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 GABRR1P24046 479 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 MRPL19P49406 292 aaKnown RBP7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 RAB7AP51149 207 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 FXYD6P3P58550 94 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 KIAA0141Q14154 515 aaPredicted RBP7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 MAPRE2Q15555 327 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 LCN12Q6JVE5 192 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 FAM86B1Q8N7N1 296 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 Q8N9W7 124 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR52B4Q8NGK2 314 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 ASB9Q96DX5 294 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 CHST6Q9GZX3 395 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 TOLLIPQ9H0E2 274 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 EFCAB1Q9HAE3 211 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 PLEKHA1Q9HB21 404 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 ZNF580Q9UK33 172 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 GPR132Q9UNW8 380 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 FOXA2Q9Y261 457 aaPredicted RBP7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 WSB1Q9Y6I7 421 aa7.3□□□□□ -1.24
SMARCAL1-213ENST00000496037 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 TCRBV3S1A0A5B6 114 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 DHRS12A0PJE2 317 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 UNC119BA6NIH7 251 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 F5H697 171 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 ARPC3O15145 178 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 RGS11O94810 467 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 S100A6P06703 90 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 LGALS1P09382 135 aaKnown RBP7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 CLUP10909 449 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 NPBWR1P48145 328 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 RAB9AP51151 201 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 CD81P60033 236 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 SUMO2P61956 95 aaKnown RBP7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 MADCAM1Q13477 382 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 CYBRD1Q53TN4 286 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 C6orf183Q5T699 404 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 LCN1P1Q5VSP4 162 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 GPR107Q5VW38 600 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 TBC1D26Q86UD7 250 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 SLC7A5P1Q8MH63 180 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 CADM3Q8N126 398 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR2T4Q8NH00 348 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 OR9G1Q8NH87 305 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 RNF183Q96D59 192 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 HSPB9Q9BQS6 159 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 C9orf16Q9BUW7 83 aa7.29□□□□□ -1.24
SMARCAL1-213ENST00000496037 IFT27Q9BW83 186 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms